Pseudomonas donghuensis: BV82_0119
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Entry
BV82_0119 CDS
T07361
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pdw
Pseudomonas donghuensis
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdw03400
]
BV82_0119 (phrB)
Enzymes [BR:
pdw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BV82_0119 (phrB)
DNA repair and recombination proteins [BR:
pdw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BV82_0119 (phrB)
Prokaryotic type
BV82_0119 (phrB)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
LAX
Microp_archaea
Motif
Other DBs
NCBI-ProteinID:
KDO01984
UniProt:
A0AAP0SNE9
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All DBs
Position
complement(992596..994038)
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AA seq
480 aa
AA seq
DB search
MQLIWLRSDLRVLDNTALAAACERGPSLAVWLLSPGQWQAHDDAACKVDFWLRNLQGLST
ALAQLNIPLLIRRADTWQQVPEALLQLCQEHRVQAVHFNDEYGVNESTRDQAVRSTLEQQ
GIAAHAYLDQLLFKPGSILTRSGGYFQVFSQFRKVCYERLHLGLPHQVKAPKAQAPTGVA
SDPVPAEAAGFPLPAQPLRELWPAGEEEARRRLRRFTDECAEDYQKQRDFPAVAGTSQLS
AYLAAGVISPRQCLHAALSNNFGEFDSGNQGLLTWINELLWREFYKHILVGYPRVSKHRA
FRAETEALPWRHAPDELKAWQQGQTGIPIIDAAMRQLLATGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSASTGTDAAPYFRIFNPLSQSLRFDRAGHFIR
QWLPELASLDEKNIHNPVPADDLFATNLYPQPIVDLGSSRQRALNAFKNLPTRQEERAVT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgcagcgacctgcgcgtactcgacaacaccgcactggcagcg
gcctgcgaacggggcccgagcctggcagtgtggctgctgagccccgggcagtggcaagcc
catgacgatgccgcgtgcaaggtcgacttctggctgcgcaacctgcaaggcctgagcaca
gcactggcgcagttgaacattccgttactgatccgtcgcgccgatacctggcagcaggta
cccgaggccctgctgcaactgtgtcaggaacatcgggtacaggccgtgcatttcaacgac
gaatatggcgtcaacgaaagcacccgcgaccaggctgtgcgctccaccctggaacagcaa
ggcattgccgctcacgcctacctcgaccaattgctgttcaagcccggtagcatcctgacc
cgcagcggtggctacttccaggtcttcagtcagttccgcaaagtctgttacgagcgtttg
cacctagggctgccacaccaggtcaaagcgcccaaggcgcaagcaccgacgggtgtggca
agcgacccggtgccggctgaagctgccggcttccctctccccgcacagcctttacgcgaa
ctttggcctgcgggtgaagaagaagcccggcgccgcctgcgacgcttcaccgacgaatgt
gccgaggactatcagaagcagcgcgattttcccgccgtcgccggtaccagccaactgtcg
gcttacctggcggccggggtgatttcgccacgccaatgtctgcacgcggcgttgagcaac
aacttcggcgagttcgacagcggtaaccagggcctgctgacctggatcaacgagctgctc
tggcgcgagttctacaagcacattctggtgggctacccgcgcgtatccaaacaccgcgcc
tttcgcgcggaaaccgaagccctgccctggcgtcacgcgccggatgagctcaaggcctgg
cagcaggggcaaaccgggatcccgatcatcgacgccgccatgcgccaattgctcgccact
ggctggatgcacaaccgcctgcgcatggttgtcgccatgttcctgaccaagaacctgctg
atcgactggcgcgaaggcgaacgctttttcatgcgtcacctgatcgacggtgacctggcc
gccaataatggtggttggcagtggagtgcctcgaccggcaccgacgcagcgccctatttt
cgcatcttcaatcccctgagccagtctctgcgtttcgaccgcgccggccacttcattcga
cagtggctccctgaactggctagcctggatgaaaaaaatatccacaatcccgtgcctgct
gacgatctttttgctactaatctttatccacaacctattgtggacctcggtagcagtcgc
caacgtgcgttgaatgcattcaagaatttacccacgcggcaggaagagagggcagtaacg
tga
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