KEGG   Pseudomonas donghuensis: BV82_0329
Entry
BV82_0329         CDS       T07361                                 
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
pdw  Pseudomonas donghuensis
Brite
KEGG Orthology (KO) [BR:pdw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdw03019]
    BV82_0329 (rapZ)
Messenger RNA biogenesis [BR:pdw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     BV82_0329 (rapZ)
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_18 AAA_33 AAA_29 SKI CoaE AAA_16 AAA_22 Rad17 mTERF
Other DBs
NCBI-ProteinID: KDO01374
UniProt: A0AAP0SIX1
LinkDB
Position
complement(1208350..1209204)
AA seq 284 aa
MRLIIVSGRSGSGKSTALDVLEDNGYYCIDNLPAGLLPQLAENALINTELMQPKVAVSID
ARNLPSHLTRFPELLEEARSRHIQCDVLYLDADEETLLKRFSETRRRHPLTNAERSLAEA
IKVESDLLGPIADLADLKIDTTNLNLYQLRDSIKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELRDHSGLEQPVIDYLAAQPDVEDMFQDISSYLLKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYLTERLGQLLQQSLKNVQVRHRDL
NT seq 855 nt   +upstreamnt  +downstreamnt
atgcgcttgatcatcgttagcggccggtccggctccggcaagagcaccgccctcgatgta
cttgaggacaacggttactactgcatcgacaacctgccggcgggcttgctgccgcagctg
gccgaaaacgccctgatcaataccgaactgatgcagcccaaggtggcggtgtcgatcgac
gcgcgcaacctgccaagccacctcacgcgcttccccgaactgcttgaggaagcccgtagc
cggcacatccagtgcgatgtcctgtacctggacgccgacgaagaaaccctgctcaagcgt
ttctcggaaacccgtcgccgccacccgctgaccaatgccgaacgctcgttggccgaagcc
atcaaggtcgagagcgatttgctcgggccgatcgccgacctcgctgacttgaagatcgac
accaccaacctgaacctctatcagttgcgtgattcgatcaagttgcgcctgctgaaccag
ccggagccaggcacggccttcctggtcgagtccttcggcttcaagcgcggcatgccggta
gacgccgacctggtgttcgatgtgcgctgcctgcccaacccttactggaagccggaactt
cgcgaccattcagggctggagcaaccggtgatcgactacctggcagcacagccggatgtc
gaggacatgttccaggacatctccagctacctgctcaaatggttgccacgctttgccgcc
agcaaccgcgcctatgtcaccattgccatcggctgcaccggcggtcaccaccgctcggtg
tacctgaccgagcgactgggacagctgctgcaacaatcgttgaagaacgtccaggttcgc
caccgcgacctctag

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