Pseudomonas donghuensis: BV82_0557
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Entry
BV82_0557 CDS
T07361
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pdw
Pseudomonas donghuensis
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdw03016
]
BV82_0557 (truD)
Enzymes [BR:
pdw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BV82_0557 (truD)
Transfer RNA biogenesis [BR:
pdw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BV82_0557 (truD)
Prokaryotic type
BV82_0557 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
KDO01602
UniProt:
A0AAP0SKH7
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All DBs
Position
1460985..1462043
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AA seq
352 aa
AA seq
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MTELELLGPRAAGEALGSAILKATAEDFQVDEVLDIPLSGAGEHLWLWVEKRDLNTEEAA
RRLARAAGVPVRSISYAGLKDRQALTRQWFSLHLPGKADPDLSAAENETLSILKQTRHSR
KLQRGAHSANGFTLRLTGLKAERAALDARLEQIRSQGVPNYFGTQRFGHGGGNVHDARDW
ASRQALPEQRNVRSRLLSSARSYLFNQVLAQRVADGSWQQAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPLWGEGQSGATGAAGALEQRIGEQHAALCQWLARAGMSHERRI
LRLPISGLTWHYPEPDILQLEFVLPAGCFATVVVRELVDLVPAGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactcgaactgctgggcccgcgtgccgcgggcgaagcgctgggcagcgcgatt
ctcaaggccaccgccgaagacttccaggtcgatgaagtgctcgacattcccctgagcggg
gccggtgagcacttgtggctgtgggtcgaaaaacgcgacctcaacaccgaagaggctgcc
cgccgtctggcccgcgccgcgggtgtgccggtacgcagcatcagctatgccggcctcaag
gaccgtcaggccctgacccgccaatggttcagcctgcatttgccgggcaaggccgacccg
gacctgagcgccgctgaaaacgaaaccctgagcatcctcaagcaaacccgtcactcgcgc
aaactgcagcggggcgcgcattcggccaatggttttaccttgcgcctgacgggccttaag
gccgagcgcgcggcgctggatgcgcggcttgagcagatccgcagccagggcgtgccgaac
tatttcggcacccagcgtttcggtcacggcggcggcaatgttcacgatgcccgcgactgg
gccagtcgccaggcgttgccggagcagcgcaacgtccgctcgcggctgctctccagcgcc
cgcagctacctgttcaaccaggtgctggcccagcgcgtcgccgacggcagctggcagcag
gcgcaggtcggtgatctgctggcgtttaccgacagccgcagcttttttccggcaggcgag
gccgaatgttccgatccgcgcctggccattctcgatctgcaccccactggcccgctatgg
ggcgaagggcagtcgggcgccacgggagcggccggcgcgctcgagcaacgcatcggtgaa
cagcacgctgccttgtgccaatggctggctcgggcgggcatgagtcacgaacgacgcatt
ctgcgactgcccattagcgggctgacgtggcattatcctgagcctgatatcctgcaactg
gaattcgtccttccggccggatgcttcgccaccgtggtggtgcgcgagcttgttgatctg
gtgccggcagggcagacggacagcccatgcgtattctga
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