Pseudomonas donghuensis: BV82_0740
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Entry
BV82_0740 CDS
T07361
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pdw
Pseudomonas donghuensis
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdw03009
]
BV82_0740
Enzymes [BR:
pdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BV82_0740
Ribosome biogenesis [BR:
pdw03009
]
Prokaryotic type
rRNA helicases
BV82_0740
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
KDO01781
UniProt:
A0AAP0SN33
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All DBs
Position
1640501..1641826
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AA seq
441 aa
AA seq
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MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPMLN
RLVDLKQKRVEIRALVLLPTRELAQQTLKEVERFSQFTFIKAGLITGGEDFKEQAAMLRK
VPDVLIGTPGRLLEQLNAGNLHLEHVQVIVLDEADRMLDMGFAEDVERLCNECPNREQTM
LFSATTGGAGLRDMIGKVLKTPEHLMLNSVSQLAEGTRQQIITADHNQHKEQIVQWLLQN
ETYDKAIIFTNTRVMADRIYGHLVAKDYKAFVLHGDKDQKDRKLAIERLKQGGAKILVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNEGLAVSLICHGDWNLMSSIER
YLKQSFERRVIKEVKGTYTGPKKVKASGKAAGVKKKKADKKGDKKVVAKRKPTAKPKPNA
PLASADGLAPLKRRKPTPTAE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagctgaaattt
gtcgagccgacgccggtgcaggcagcggccatcccattggcgttgcaagggcgtgacctg
cgggtgacggcgcaaaccggtagcggcaagactgcggccttcgtcctgccgatgctcaac
cgcctggttgacctcaagcaaaaacgtgtcgaaattcgcgccctggtgctgctgccgacc
cgcgagctggcgcagcagaccctcaaggaagtcgagcgtttctcccagttcaccttcatc
aaggccggcctgatcaccggcggtgaagacttcaaggaacaggcagcgatgctgcgcaag
gtgccggacgtgctgatcggcaccccgggtcgcctgctcgagcagctcaatgccggcaac
ctgcacctggagcatgtccaggtcatcgtgctcgatgaagccgaccgcatgctcgacatg
ggctttgccgaagacgtcgagcgcctgtgcaacgaatgcccgaaccgtgaacagaccatg
ctgttctccgccaccaccggcggtgccggcctgcgcgacatgatcggcaaagtgctgaaa
acccctgaacacctgatgctcaacagcgtcagccagctggccgaaggcacccgccagcag
atcatcaccgccgaccataaccagcacaaagaacagatcgtgcagtggctgctgcagaac
gagacctacgacaaggcgatcatcttcaccaacacccgggtgatggccgaccgcatctac
gggcacctggtggccaaggactacaaggcgttcgtgctgcacggcgacaaggaccagaag
gaccgcaagctggcgatcgagcgcctgaagcagggcggcgccaagatcctcgttgccacc
gacgtcgccgcccgcggcctggacgtcgacggcctggacctggtgatcaacttcgacatg
ccacgcagtggcgacgagtacgtgcaccgcatcggccgtaccggccgtgccggtaacgaa
ggcctggcggtatcgctgatctgccacggcgactggaacctgatgtcgagcatcgagcgc
tacctgaagcagagcttcgagcgtcgggtgatcaaggaagtcaaaggtacgtacaccggg
ccgaagaaggtcaaggcctcgggcaaggcggccggtgtgaagaagaaaaaagctgacaag
aaaggcgacaagaaggtcgtagccaagcgcaagccgaccgccaagccgaagcctaacgcc
ccgctggccagcgccgatggcctggcaccgctcaagcgccgcaagccgacgccgactgcg
gagtaa
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