Pseudomonas donghuensis: BV82_0829
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Entry
BV82_0829 CDS
T07361
Name
(GenBank) VCBS domain-containing protein
Organism
pdw
Pseudomonas donghuensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_4
Big_9
HemolysinCabind
DUF8477
RND-MFP_C
RL11D
Motif
Other DBs
NCBI-ProteinID:
KDO01865
UniProt:
A0AAP0SMM6
LinkDB
All DBs
Position
complement(1729528..1739094)
Genome browser
AA seq
3188 aa
AA seq
DB search
MATTTTTSGGTVTSLSNTPQAQDDIFTTGVIGASTAAITEDLLRVIYLDVMSNDLGGNAK
TLWSLDDATSLSTATKIYAPADLLIQDTGRIEATSTDTSFNGAKIWISSDGKVGYDAATL
STAFKAQLQSLAAGGTLTDSFTYAIRLGNGTLSWATAQVQFAGVNDAVTISIGAQSGTVT
EEGATTLSPTDSLNTTGTIAFNDVDLSDTHTASFVAAGGNTTALGNFVLAPVSEAANAAN
GTVNWTYTLNNAAAQHLAQGQTATETYVVTLNDGHGSTTTRDVTITITGTNDQVQITSGV
QAGDAKEDSGDYAASGSITFTDVDLIDTHSVSVTPGASGYLGTFTTNPLSDSTGTGSGSL
GWNFAVNNSALQFLGQGQSVTQTYNVVIGDGAVQTVSITITGTNDQPTLTIVDSTGAMNE
GNGTATLSDSGALSFADLDNADTVTVSQTANNDIVWSAGVLNAGVASALVTGFSVDQNSW
DYSSNQNLDFLGAGETIAFSYAVVATDDSGAANAASSTQTVTITITGTNDAPVLSFATGN
DAGAVQEDTTLSVSGQFSSADIDHAATATWSIAGTDTGTYGSIVVDSTGKWTYTLANGTD
GVASAVQSLKAGESHDEVFSVQVSDGLGGVDTQLVTVTVSGTNDVAVLSSASITLTETNA
PLSTNGTLTISDVDSAATFVAQTNTAGSYGQFSIGTDGAWSYVADSAHNEFVAGTTYTDT
FTVLSADGTATAVTVTINGSNDAAVLSSASVTLTEADAPLTTAGTLTISDVDSAATFVAQ
SNTAGSYGQFSLGTNGAWSYVADSAHNEFVAGTTYTDTFAVSSADGTATAVTVTITGSND
AAVLSSASVTLTEADAPLTTNGTLTISDVDSAATFVAQTNTAGSYGQFSLGTDGAWSYVA
DSAHNEFVAGTTYTDTFAVSSADGTLTSVTVHILGSNDAAVLSSASVTLTEADAPLTTAG
TLTISDVDSAATFVAQTNTAGSYGQFSLGTDGAWSYVADSAHNEFVAGTTYTDTFVVSSA
DGTATAVTVTITGSNDAAVLSSASVTLTEADAPLTTAGTLTISDVDSAATFVAQSNTAGS
YGQFSLGTNGAWSYVADSAHNEFVAGTTYTDTFAVSSADGTATAVTVTITGSNDAAVLSS
ASVTLTEADAPLTTNGTLTISDVDSAATFVAQTNTAGSYGQFSLGTDGAWSYVADSAHNE
FVAGTTYTDTFTVSSADGTATAVTVTITGSNDAAVLSSASITLTETDAPLTTAGTLSISD
VDSAATFVAQTNTAGSYGQFSISTGGAWSYVADSAHNEFIAGTTYTDTFTVSSADGTATA
VTVTITGSNDAAVLSSASVTLTETDAPLTTNGTLTISDVDSAATFVAQSNTAGSYGQFSI
STGGAWSYVADSAHNEFVAGTTYTDTFTVSSADGTATAVTVTITGSNDAAVLSSASITLT
ETDAPLTTAGTLSISDVDSAATFVAQTNTAGSYGQFSISTGGAWSYVADSAHNEFIAGTT
YTDTFTVSSADGTATAVTVTITGSNDAAVLSSASVTLTETDAPLTTNGSLTISDVDSAAT
FVAQTNTAGSYGQFSLGTDGAWSYVADSAHNEFVAGTTYTDTFTVSSADGTLTSVTVHIL
GSNDAAVLSSASVTLTETNAPLSTNGTLTISDVDSAATFVAQTNTAGSYGQFSIGTDGAW
SYVADSAHNEFIAGTTYTDTFTVSSADGTATAVTVTITGSNDAAVLSSASITLTETNAPL
STNGTLTISDVDSAATFVAQSNTAGSYGQFSIGTNGAWSYVADSAHNEFVAGTTYTDTFT
VLSADGTATAVTVTITGSNDAAVLSSASITLTETDAPLTTNGTLTISDVDSAATFVAQTN
TAGSYGQFSLGTNGAWSYVADSAHNEFVAGTTYTDTFAVSSADGTLTSVTVHITGSNDAP
VMTAGGSLSYTENQVATTINSALTVTDIDSSNLTGATVSITSNFATGQDVLAFTNQNGIT
GSYNAGTGVLTLTGAATVAQYQTALRSVTYSNSSDNPSTTARTISFQVDDGTAANHASNV
ATTTVTVSAVNEAPTTSGLAITETSISFVAADPDNATLSLQSPFAAAFGNPSITSGASTN
LSPVEQGSVVSGTLQVKDGSVAASVVELYLGTSAGNNFQAGSSDTAIYGFGGTDNLSGGA
GADWIFGGAGNDVIVGAANDRLLDGGTGTDTLNVGSVFINTSDSQIANIESIQLTAASGV
LILNAQTESFTIFGTSGADQIVTGSGNDTIFGTDNDTLLDGGTGTDTLGTGPNFTSTSDG
QITGIENVLIGTAATLNLSNQTEGFTITGSSGVDTITGGTGADSISAAGGNDIINGAQND
TLLDGGTNTDTLNVSANFTSTSNAQIANIENVTLTVSGLTLNLGNQTEAFNINGSSGVDN
ISGGSGADTINGQAGNDTLTGNGGADQFRLRTNGGTDTITDYTDNIDKIGFLGGAVTGGV
GFTTAGSSAGTALLSADFQTRNSISNINNNDDNKIDLIDASSQTTSQITTGTGGGATNTY
VIVFNSTTGKGEIWFDTDWSNTASRVQVATLNNVTTLAGVANITASDIVVHDSILGPAGV
AGSPINLGLTDAVTHADVTTVSISGLPAGWTLNQGTDNGNGTWTVDQSSLDTLTVTTAAD
FVGARVLPVTMTWTNADGTVESEVIRDNVEAYAPGSPIFALSADDNLTGSSSADLFVFAQ
PIGNNVIHGFDAAADKIDLIGFTGVTGYADLSIANDANGDALVNIGSGQTVTLKGVDAAD
LCEANFQFDVDPLTNNAGTLSIADGAIMPFGGSIHNTGTIELGSAGSATHLEILFRGATL
TGGGQVQLSDSAQNVIFGGSADTVLTNADNRISGAGQLGAGQMVLVNAGLILASGLNSLV
LDTGTHTITNSGVLESTGTGGMTVASAVDNSGHLWANGGDLHLLADVTGNGNATIDGDAT
LSFDGTAHTSVAFHGEGAGTLVIAQAEAASSLVGILGLESDDMLTFGDLAFGANTQLSYN
ANASGAGGLLTVDDGVHRAEVNLLGHYSVNDFQATDGGEAGTQVSYHGESSGTLVGSMAA
DVLSGGDGNDIIVGRGGEDTLSGGAEADVFAYFNVNEGGDHILDYNFAEGDTVDLCALLS
ANFVSGTSQVSDFVQLAQSGSDITVKVDVDGAANGTNFADVAVLANTGTSGTDLVRTWFG
EADHTLTA
NT seq
9567 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaccacaacgaccagcggcggcaccgttacttcgctttccaacactccgcag
gcgcaggacgacattttcactaccggtgtaattggcgcgagcaccgcggccatcactgaa
gacctgctgagagtcatatacctggacgtcatgtccaatgacctcggcggcaacgcaaag
acactttggtcactcgatgacgcgaccagtctttctactgccaccaagatttatgcgccg
gccgacctcctgatccaggacaccggcagaattgaggcgacgagtactgacaccagtttc
aacggggcaaagatctggatttcgtcggatggcaaggtcggctacgacgccgctacgttg
tcgactgctttcaaggcacaactccagtcgcttgctgccggaggcaccctgacagacagc
tttacctatgcgattcgtctgggcaacggcacgctcagctgggccactgcgcaggtgcaa
ttcgctggcgtgaatgacgctgtgacaataagcatcggcgcacagtccggcacggtaacc
gaagagggagctacgacgctgagcccgaccgactcgctgaatacgacaggcactattgct
tttaacgatgtagacctgagcgacacacataccgcctctttcgtggctgcgggaggcaac
accacagcgctgggcaacttcgtccttgcgccagtgagtgaagcggccaacgcggcaaac
ggcaccgttaactggacttacaccctgaataatgcggcggcccagcacctggctcagggt
cagactgctaccgaaacctatgtggtcaccctcaatgatgggcatggctcgacgacaacg
cgggatgtaactatcaccatcaccggcaccaacgaccaagtacagatcaccagtggcgtg
caggccggcgatgccaaggaagacagcggcgactacgcggccagcggcagcatcaccttc
actgacgtcgacctgatcgacacccatagcgtcagcgtcacgccaggtgcttccggctat
ctgggcactttcaccactaacccactgagcgacagcaccggcacgggcagcggttctctt
ggctggaactttgcggtgaacaactccgcattgcagttcctcggccaaggccagagcgtc
acccaaacctataacgtggtaatcggcgacggcgcggtgcagaccgtgagcattacgatt
accggcaccaacgaccagccgacgctgacgattgtcgacagcactggtgcgatgaacgaa
ggcaacggcacggccaccctgagtgacagcggtgccctgagctttgccgatctggacaac
gccgacacagtgaccgtgtcgcagaccgctaacaacgacatcgtctggagcgccggcgtg
ctcaatgcgggcgtggcctcggcgctggtaaccggtttctcggtcgaccagaacagctgg
gattacagcagcaatcagaacctcgacttcctcggtgcgggtgaaaccatcgctttctcg
tacgcggtggtcgcgaccgacgatagcggcgcggctaacgctgcctcgtcgacacagact
gtcaccatcactatcaccggcactaacgacgcgcccgtactcagcttcgcaacgggcaat
gatgccggtgcagtgcaggaagacaccacactcagcgtgagcggccagttcagttccgcc
gacatcgatcacgctgccaccgcgacctggagcatcgccggtacggataccggcacttac
ggctcgatcgtagtcgacagcaccggaaaatggacttacaccttggccaatggcaccgat
ggcgtcgccagtgcggtgcagtcgctgaaggcgggcgagagtcacgatgaagtgttcagc
gtgcaggtcagcgatggcctgggtggcgtggacactcaactggtgaccgttaccgtcagc
ggcaccaacgacgtcgccgtactgtcctcggccagcatcacgctgaccgaaaccaatgcc
ccactgagcaccaacggcaccctgaccatcagcgacgtcgacagcgccgcaaccttcgtc
gcccagaccaacaccgccggcagttacggccagttctccatcggcaccgacggcgcctgg
agctacgtcgccgatagcgcccacaacgagttcgtcgccggcaccacctacaccgacacc
ttcacggtactcagtgccgacggcaccgcgaccgcagtgacggtgaccatcaacggcagc
aacgatgctgccgtgctgtcctcggccagcgtcacgctgaccgaagccgatgccccgctg
accacggctggcaccctgaccatcagcgacgtcgacagcgccgcgaccttcgtcgcccag
tccaacaccgccggcagctacggccagttctccctcggcaccaatggtgcctggagctat
gtcgccgactccgcccacaacgagttcgtcgccggcaccacctacaccgacaccttcgcg
gtgagcagtgccgacggtaccgcgaccgcagtgacagtgaccatcaccggcagcaatgac
gctgccgtgctgtcctcggccagcgtcacgctgaccgaagccgatgccccactgaccacc
aacggcaccctgaccatcagcgacgtcgacagcgccgcgaccttcgtcgcccagaccaac
accgccggcagttacggccagttctccctcggcaccgatggtgcctggagctacgtcgcc
gatagcgcccacaacgagttcgtcgctggcactacctacaccgacacctttgcggtgagc
agtgccgacggcaccctcacgtcggtcaccgtgcatattctcggcagcaacgacgctgcc
gtgctgtcctcggccagcgtcacgctgaccgaagccgatgccccgctgaccacggctggc
accctcaccattagcgacgtcgacagcgccgcgaccttcgtcgcccagaccaacaccgcc
ggcagttacggccagttctccctcggcactgacggtgcctggagctacgtcgccgatagc
gcccacaacgagttcgtcgccggcaccacctacaccgacaccttcgtggtgagcagtgcc
gacggtaccgcgaccgcagtgacagtgaccatcaccggcagcaatgacgctgccgtgctg
tcctcggccagcgtcacgctgaccgaagccgatgccccgctgaccacggctggcaccctg
accatcagcgacgtcgacagcgccgcgaccttcgtcgcccagtccaacaccgccggcagc
tacggccagttctccctcggcaccaatggtgcctggagctatgtcgccgactccgcccac
aacgagttcgtcgccggcaccacctacaccgacaccttcgcggtgagcagtgccgacggt
accgcgaccgcagtgacagtgaccatcaccggcagcaatgacgctgccgtgctgtcctcg
gccagcgtcacgctgaccgaagccgatgccccgctgaccaccaacggcaccctgaccatc
agcgacgtcgacagcgccgcgaccttcgtcgcccagaccaacaccgccggcagttacggc
cagttctccctcggcactgacggtgcctggagctacgtcgccgatagcgcccacaacgag
ttcgtcgctggcactacctacaccgataccttcacggtgagcagtgccgacggtaccgcg
accgcagtgacagtgaccatcaccggcagcaatgacgctgccgtgctgtcctcggccagc
atcacgctgaccgagaccgatgccccgctgaccacggctggcaccctcagcatcagcgat
gtcgacagcgccgcaactttcgtcgcccagaccaacaccgccggcagttacggccagttc
tccatcagcacgggcggtgcctggagctacgtcgccgatagcgcccacaacgagttcatc
gccggcaccacctacaccgataccttcacggtgagcagtgccgacggcaccgcgaccgca
gtgacagtgaccatcaccggcagcaatgacgctgccgtgctgtcctcggccagcgtcacg
ctgaccgaaaccgatgccccactgaccaccaacggcaccctgaccatcagcgacgtcgac
agcgccgcgaccttcgtcgcccagtccaacaccgccggcagttacggccagttctccatc
agcacgggcggtgcctggagctacgtcgccgatagcgcccacaacgagttcgtcgctggc
actacctacaccgataccttcacggtgagcagtgccgacggtaccgcgaccgcagtgaca
gtgaccatcaccggcagcaatgacgctgccgtgctgtcctcggccagcatcacgctgacc
gagaccgatgccccgctgaccacggctggcaccctcagcatcagcgatgtcgacagcgcc
gcaactttcgtcgcccagaccaacaccgccggcagttacggccagttctccatcagcacg
ggcggtgcctggagctacgtcgccgatagcgcccacaacgagttcatcgccggcaccacc
tacaccgataccttcacggtgagcagtgccgacggcaccgcgaccgcagtgacagtgacc
atcaccggcagcaatgacgctgccgtgctgtcctcggccagcgtcacgctgaccgaaacc
gatgccccactgaccaccaacggcagtctgaccatcagcgacgtcgacagcgccgcgacc
ttcgtcgcccagaccaacaccgccggcagttacggccagttctccctcggcaccgatggt
gcctggagctacgtcgccgatagcgcccacaacgagttcgtcgccggcaccacctacacc
gataccttcacggtgagcagtgccgacggcaccctcacctcggtcaccgtgcatattctc
ggcagcaacgacgctgccgtgctgtcctcggccagcgtcacgctgaccgaaaccaatgcc
ccactgagcaccaacggcaccctgaccatcagcgacgtcgacagcgccgcgaccttcgtc
gcccagaccaataccgctggcagttacggccagttctccatcggcactgacggtgcctgg
agctacgtcgccgatagcgcccacaacgagttcatcgccggcaccacctacaccgatacc
ttcacggtgagcagtgccgacggcaccgcgaccgcagtgacagtgaccatcaccggcagc
aatgacgctgccgtgctgtcctcggccagcatcacgctgaccgagaccaatgccccactg
agcaccaacggcaccctgaccatcagcgacgtcgacagcgccgcgaccttcgtcgcccag
tccaataccgctggcagttacggccagttctccatcggcactaatggcgcctggagctac
gtcgccgactctgctcacaacgagttcgtcgccggcaccacctacaccgacaccttcacg
gtactcagtgccgacggcaccgcgaccgcagtgacagtgaccatcaccggcagcaatgac
gctgccgtgctgtcctcggccagcatcacgctgaccgaaaccgatgccccgctgaccacc
aacggcaccctgaccatcagcgacgtcgacagtgccgcaactttcgtcgcccagaccaac
accgccggcagttacggccagttctccctcggcaccaatggtgcctggagctatgtcgcc
gactccgcccacaacgagttcgtcgccggcaccacctacaccgacaccttcgcggtgagc
agtgccgatggcaccctcacctcggtcaccgtccacatcactggcagcaacgacgcgccg
gtaatgacggctggtgggtctctgtcatacacagaaaaccaagtagcgacgacgatcaac
tcggcgctgacggtcaccgatatcgacagtagcaacctgacgggcgcgacagtatcgatc
accagtaacttcgccacgggtcaagacgtactcgcgttcaccaaccagaacggcattacc
ggcagctacaacgctggcactggcgtgctgacactgaccggagctgctacggtggcgcag
tatcagaccgcgctgcgctcggtgacctactccaacagtagcgacaacccttcaacgacg
gcgcgcaccattagcttccaggtggatgatgggacggcggccaaccatgccagcaatgtc
gcaacaacgaccgtcacggtgtcggcagtcaacgaagcaccgacgacttctggcttggcc
ataaccgagacgtcgatcagcttcgtcgcggccgacccggacaatgcgacgctgtcgctg
cagagtccatttgccgcagcattcggcaacccctcgatcaccagcggcgccagcacgaat
ctgtcccccgtggagcaaggctccgtggtgtcgggtaccttgcaggtgaaagatggcagt
gttgcggcgagcgtggtggaactctatctcggcacgagcgcgggcaacaacttccaggcg
ggcagttccgatacggcgatctacggcttcggtggcacggacaatctgtccggcggtgcc
ggtgctgactggatttttggcggcgcgggcaacgacgtgatcgttggcgcggcgaatgac
cgcctgctcgacggcggcaccggaaccgataccctcaatgtcggtagtgtcttcatcaat
acgagcgacagccagatcgcgaacattgaaagcatacaactcaccgcagcgtcaggagta
ctgatcctgaacgctcaaaccgaaagcttcaccatctttggtacttcgggtgccgatcaa
atcgtcacgggcagcgggaatgacacgatctttggcactgacaacgacacactgctggat
ggcggtactggcaccgacaccctgggtacgggtcccaacttcacgagcacaagcgacggg
caaattaccggtatcgagaatgtattgatcggaacggcagcgaccctgaacctctccaac
cagaccgaaggcttcaccattaccggttcttcgggtgtcgacaccatcaccggcggcaca
ggtgcagacagcatcagcgcggcgggtggcaacgacatcatcaacggtgcgcagaacgac
acgctgctcgacggcggaaccaataccgatacgctcaacgtcagcgcgaacttcaccagc
accagcaacgcccagatcgccaatatcgaaaacgtgacgctgacggtttcagggctgacg
ctcaacctgggcaaccagaccgaagccttcaatatcaatggctcatccggcgtcgataac
atcagcggcggcagcggggccgacaccatcaacggccaggcgggcaacgatacgctgacc
ggtaatggcggggctgaccaattccggttgcgcaccaacggtggcacggacacgatcacc
gactacacggacaacatcgacaagattggcttcctgggtggtgccgtgacgggtggtgtc
ggcttcacaaccgcagggagttcggccggtacagcgctgctctccgccgactttcaaact
cgcaacagcatcagcaacatcaacaacaatgacgacaacaagattgatctgatcgacgcg
agttcgcagacgacgtcacagatcacaaccggcactggcggcggtgccaccaacacctac
gtgatcgtattcaactcgacgaccggcaagggcgaaatctggtttgacacagactggagc
aatacggcgagtcgggtacaagtggcaacgctgaacaacgttacaacgttggccggggtc
gctaacatcacagcctcagacatcgttgtccatgacagtatcctcggtccagccggtgtt
gccggcagcccgattaacctgggcctgaccgatgcggtgactcacgcagatgtcaccacg
gtgagcatttccggtcttcccgcaggctggaccctgaaccagggcaccgacaatggcaac
ggcacctggacggtggaccagagcagcctggacacactgacggtcacaacagcggcggat
ttcgtgggcgccagggttttgccagtcaccatgacctggaccaatgccgatggcacggtg
gaaagcgaagtcattcgtgacaacgtcgaggcctacgcccccggctcgccaatcttcgcc
ttgtcagcggacgacaacctcaccggttccagcagcgccgacctgttcgtgttcgcccag
ccgatcggcaataacgtcatccatggcttcgatgcggcggcggacaagatcgacttgatc
ggcttcaccggtgtcactggttatgctgacttgagtatcgctaacgacgcaaacggcgat
gcgctggtcaacatcggctccggccagacggtcaccctgaaaggtgtcgatgcggcggac
ttgtgcgaagcgaacttccagttcgatgtggacccgctcaccaacaacgccggtaccctc
agcattgccgacggcgcgatcatgccgttcggtggcagcatccataacaccggcacgatc
gagctcggctctgccggcagtgcgacccaccttgagattctgtttcgtggcgcaaccttg
accggtggcggtcaggtgcagctatccgacagcgcgcagaacgtgattttcggtggcagc
gccgacaccgtgctgaccaatgccgacaaccgcatttccggtgccggccagttgggcgca
gggcagatggtgctggtcaatgcggggctgatcctggccagcgggctgaacagtctggtg
ctcgacaccggcacccacaccatcaccaacagcggagtgctggaatctacgggtacaggc
ggcatgacggtggccagtgcggtcgacaactccggccacctgtgggccaatggtggcgac
ctgcacctgctggccgacgtgaccggcaatggcaatgccaccatcgacggcgacgcaacc
ctgagcttcgatggcaccgcccatacctcagtcgccttccacggcgaaggtgcaggcacg
ctggtgatcgcacaggccgaagcggcgagctcgctggtcggcatcctcggtctggaaagc
gatgacatgctgaccttcggcgatctcgccttcggcgccaacacccaactcagctacaac
gccaacgcctctggcgccggcggcctgctgacggtggatgacggtgtgcaccgggctgaa
gtgaatctgctggggcactactcggtgaatgacttccaggccaccgacggcggcgaggcc
ggcacccaggtcagttaccacggcgaatccagcggcacactggtggggagtatggcggcg
gacgtactcagtggcggcgacggcaacgacatcattgtgggtcgtggcggggaggatact
ctcagcggtggcgcggaagccgatgtgttcgcctacttcaacgtgaatgaaggcggcgac
catattctcgactacaacttcgccgaaggtgacacagtcgacctctgcgcattgctcagt
gccaacttcgttagcggtaccagccaggtgtccgactttgtccaactggcgcagtccggc
agcgacatcaccgtgaaggtggatgtcgatggcgcagccaatggtacgaacttcgccgat
gtggcggtccttgccaacacgggcacgagcggtaccgatctggtgcgcacctggtttggg
gaggctgaccatacgctgacggcttga
DBGET
integrated database retrieval system