Pseudomonas donghuensis: BV82_1360
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Entry
BV82_1360 CDS
T07361
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw00300
Lysine biosynthesis
pdw00470
D-Amino acid metabolism
pdw01100
Metabolic pathways
pdw01110
Biosynthesis of secondary metabolites
pdw01120
Microbial metabolism in diverse environments
pdw01230
Biosynthesis of amino acids
Module
pdw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BV82_1360 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BV82_1360 (lysA)
Enzymes [BR:
pdw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BV82_1360 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
KDO00906
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All DBs
Position
2314152..2315390
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AA seq
412 aa
AA seq
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MIDSAPFELLADAVRRHGSPLWAYDAKTIIDRIENLQDFDTVRYAQKANPNVHILRLMRA
RGLVLDAVSLGEIERALAAGASFDGQPAGVVLTCDVLDQVTLARVIESRIEVNAGSIDML
RQLGERSPGHRVWIRINPGFGHGHSRKTNTGGENSKHGIWHEQLGEALDCIRTYDLHLVG
VHMHIGSGVDYEHLEQVARSMIELVGQLDRDIEAFSIGGGLSVPYRRTDMPVDIQRYART
WAAARKEIEEVLGHSVRMEIEPGRYLIAEAGYLVTEVRAVKQMGRTTFILVDAGFNDLIR
PALYGSYHRMTLLDADGIPVSRPLQPTMVAGPLCESGDVFTQDEHALAGQDLPQARVGDL
LVIHDSGAYGASMSSNYNSRPLLPEVLIENASFRMIRRRQDIQDLLNLELCI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgatcgactctgcaccgttcgaattattggccgacgcggttcgccgacacggctcgccc
ctatgggcatacgacgcaaaaaccatcatcgatcgtatcgaaaatctgcaagacttcgac
acggttcgctacgcgcagaaggccaatccaaacgtgcatatcctgcgcttgatgcgggca
cgaggcctggtcctcgatgccgtctcactaggtgaaatcgaacgggccctggctgcgggg
gcatcgttcgatggccagccagcgggggtggtgctgacgtgcgatgtgctggaccaggtg
accctggcccgggtgatcgagtcaaggatagaagtgaacgcgggctcaattgacatgctc
cggcagctgggcgagcgctccccaggacaccgggtttggattcggatcaaccccgggttc
ggccatggacacagtcgcaagaccaacacgggcggtgaaaacagcaaacatggcatttgg
cacgaacagctgggcgaggcgcttgactgtatcaggacctacgatttgcatctggtaggc
gtgcacatgcacatcggctcaggagtggattacgagcacttggagcaggttgctcgatcg
atgattgagcttgttggtcagctagatagggatatcgaggctttctcgattggcggaggg
ctgtctgttccgtatcgacgcaccgacatgccggtcgatatccagcgctacgctcggaca
tgggcggcggcccgcaaggaaatcgaggaagtacttggtcattccgtgcgaatggagata
gagccgggccggtacctgatcgcagaggcgggctacctggtgaccgaggtccgcgccgtg
aaacaaatgggccgcactactttcatcctggttgatgccggctttaacgacttgatacgg
ccggccttgtacggcagttaccaccgcatgacgttgctagacgccgacgggattccggtg
tctcgccctttgcaacccaccatggtagctgggccgctgtgcgagtccggcgatgttttc
acccaggacgaacacgccctggccggccaagacctgccgcaggcccgtgtcggtgatctt
ctggtgatccatgattcgggcgcctatggtgcttcgatgtcttcaaactacaacagtcgg
cctttgttgcccgaggtcctgattgagaacgcaagttttcggatgatcaggcggcgacaa
gacatacaggatcttctgaacctggagctgtgcatatga
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