KEGG   Pseudomonas donghuensis: BV82_1573
Entry
BV82_1573         CDS       T07361                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pdw  Pseudomonas donghuensis
Pathway
pdw00300  Lysine biosynthesis
pdw00470  D-Amino acid metabolism
pdw01100  Metabolic pathways
pdw01110  Biosynthesis of secondary metabolites
pdw01120  Microbial metabolism in diverse environments
pdw01230  Biosynthesis of amino acids
Module
pdw_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pdw00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BV82_1573 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BV82_1573 (dapF)
Enzymes [BR:pdw01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     BV82_1573 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF SPO11_like Tail_completion_gp17
Other DBs
NCBI-ProteinID: KDO00479
UniProt: A0AAP0SIL6
LinkDB
Position
5623435..5624265
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPSNPEVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKGGIIELDVRNDGQISVDM
GPPRLVPAEIPFEAPAQALSYPLEVAGRNVELFAASMGNPHAVLRVDDINAAPVHELGPQ
IEHHPRFPQRVNVGFIQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGTPVLMTGPAVRVFEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttaccaagatgcatgggctgggcaacgacttcatggtcctcgacctg
gtcagccagcatgcgcacattttgcccaagcacgccaagcaatggggcgaccgccacacc
ggcatcggcttcgaccaactgctgatcgtcgaggcgccaagcaatccggaagtggatttc
cgctaccggatcttcaacgccgacggctccgaggtcgaacagtgcggcaacggtgcgcgc
tgctttgcgcgcttcgtgctggacaagcgcctgaccgcgaaaaaacgcatccgcgtcgaa
accaagggcggcatcatcgagctggacgtgcgcaacgacgggcagatcagcgtcgacatg
ggcccgccgcggctggtgccggccgagatcccgttcgaggcgccggcccaggccctgagc
tacccgctcgaggtcgccgggcgcaacgtggaactcttcgccgcatcgatgggcaacccc
catgcggtactgcgggtcgacgacatcaacgccgcaccggtgcacgaactgggcccgcag
atcgaacatcacccgcgcttcccgcagcgggtcaatgtcggcttcatccaggtcatcgac
cgccaccgcgcgcaactgcgggtgtgggaacgtggcgctggcgaaacccaggcctgcgga
accggcgcctgcgccgcagccgtggcggcgatcagccagggctggatggactcaccgctg
ttgatcgacctgccgggtgggcgcctgtccatcgaatgggcaggcccgggcacaccggtg
ctgatgaccggccccgccgtacgcgtgtttgaaggacaggttcgtctatga

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