Pseudomonas donghuensis: BV82_1709
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Entry
BV82_1709 CDS
T07361
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw00521
Streptomycin biosynthesis
pdw00523
Polyketide sugar unit biosynthesis
pdw00525
Acarbose and validamycin biosynthesis
pdw00541
Biosynthesis of various nucleotide sugars
pdw01100
Metabolic pathways
pdw01110
Biosynthesis of secondary metabolites
pdw01250
Biosynthesis of nucleotide sugars
Module
pdw_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BV82_1709 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BV82_1709 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
BV82_1709 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BV82_1709 (rfbB)
00525 Acarbose and validamycin biosynthesis
BV82_1709 (rfbB)
Enzymes [BR:
pdw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
BV82_1709 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
KDO00615
UniProt:
A0AAP0XFH3
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All DBs
Position
5484223..5485305
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AA seq
360 aa
AA seq
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MRILITGGAGFIGSALVRHLINNTEHEVLNLDKLTYAGNLESLTSIATDTRYEFVQADIA
DQATVSGVLERFKPHAIMHLAAESHVDRSIDGPSDFIHTNIVGTYSLLEATRAYWLTLPS
DERAAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLP
VLVTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLFVEDHARALLKVVT
EGKVGETYNIGGHNEQKNIDVVRGICALLEELAPQRPAGIANYADLITYVQDRPGHDQRY
AIDASKIERELGWVPEETFETGLRKTVQWYLDNLEWCQRVQDGSYQGQRLGASEFKDLIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattctcatcaccggcggggccggcttcatcggttcggcgctggtgcgtcacctg
atcaacaataccgagcacgaagtactcaacctggacaagctgacctatgccggtaacctg
gaatcgctgaccagcatcgcgaccgatacccgctacgaattcgtccaggccgatattgca
gatcaggcaaccgtcagtggcgtgcttgaacgtttcaaaccccacgcgatcatgcacctg
gccgcagagtcgcatgtagatcgttcgatcgacggtccttcggactttatccacaccaat
atcgtcggcacctacagcctgctggaggccacccgcgcctactggctgaccctgccgagc
gatgagcgtgcggcattccgcttccatcacatttccaccgacgaagtgtatggcgacctg
catggcgtcgatgacctgttcaccgaaaccacgccttacgcgccaagttcgccgtactcg
gcaagcaaggccgcgtccgatcatctggtccgggcctggcaacgcacctacggtctgccg
gtactggtgaccaactgctcgaacaactacgggccgttccacttcccggaaaaactcatt
ccgctggtgattctcaatgctctggctggcaaaccgctgcctgtgtatggcaacggtctg
caggtgcgtgactggctgttcgtcgaggaccacgcccgcgccctgctcaaggtagtgacc
gaaggcaaggtgggcgagacctacaacattggcgggcataacgaacagaagaacatcgac
gtggtccgcggcatttgcgcactgctcgaagagctggcaccgcaacgtccggcgggcatt
gccaactatgccgacctgatcacctacgttcaggatcgccctggccatgatcagcgttat
gcaatcgacgccagcaaaatcgaacgtgaactgggctgggtccctgaagagaccttcgag
accggcctgcgcaagaccgtacagtggtacctggacaacctggagtggtgccagcgggtc
caggacggcagttatcaaggccagcgcctgggcgccagcgaattcaaggatctgattgca
tga
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