Pseudomonas donghuensis: BV82_1731
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Entry
BV82_1731 CDS
T07361
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
BV82_1731 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pdw02044
]
BV82_1731 (tssB)
Secretion system [BR:
pdw02044
]
Type VI secretion system
Imp/Vas secretion system core components
BV82_1731 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T6SS_VipA
HTH_NPRL3
Motif
Other DBs
NCBI-ProteinID:
KDO00191
UniProt:
A0AAP0SGU7
LinkDB
All DBs
Position
5452624..5453139
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AA seq
171 aa
AA seq
DB search
MANPSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPAEPLAPVAERK
FLEIDVDNFDSRLKAMQPRVAFHVPNELTGEGNLSLDITFESMDDFSPAAVARKVDSLNQ
LLEARTQLANLLTYMDGKTGAEEIIMKAIKDPALLQALASAPKPQDAEPNA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaccccagttctcagaaattcattgcgcgcaatcgcgcgccgcgggtgcagatc
gagtatgacgtcgagctctacggcgccgaaaagaaggtccagctgcctttcgtcatgggc
gtcatggctgacctcgcaggtaagcccgccgagccgctggcgccggtggccgaacgcaag
ttcctggaaatcgacgtcgacaacttcgactcgcgcctcaaggccatgcagccacgggta
gccttccacgtccccaacgaactcaccggggaaggcaacctgagcctggacatcaccttc
gagagcatggacgacttcagccctgccgccgtagcgcgcaaggtcgactcgctgaaccag
ttgctcgaagcgcggacccaactggccaacctgctgacctacatggacggcaagaccggc
gccgaagaaatcatcatgaaagccatcaaggatccggccctgctccaggccttggccagt
gcgccaaagccccaggatgccgagccgaacgcttaa
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