Pseudomonas donghuensis: BV82_1737
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Entry
BV82_1737 CDS
T07361
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw02025
Biofilm formation - Pseudomonas aeruginosa
pdw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BV82_1737 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
BV82_1737 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pdw02044
]
BV82_1737 (tssM)
Secretion system [BR:
pdw02044
]
Type VI secretion system
Imp/Vas secretion system core components
BV82_1737 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
KDO00197
UniProt:
A0AAP0SHL3
LinkDB
All DBs
Position
complement(5443060..5446563)
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AA seq
1167 aa
AA seq
DB search
MKAFFGFVVRWVIPLLGLIALSLIIWFIGPLWDVLVPAGRRWALIALLFAAWIGYRLWRF
IQARRQAAEVMRSLAAETAPDPASVATAEELATLRQRMDEALALLKKARLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAIRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSHAQVDKAAWLGFLDLLKKQRARRPIDGAFIAISLSDLLLGSDAERAAHAAAIR
SRIQELYSQLGVRFPIYLMLTKLDLVPGFMEFFDTLSKEERAQVWGMTFALDDDQSAEGP
LAQFQSEFAGLEQRLNARLVERLQQERDPARRDLVYGFVQQFAALRSNLQSFLDGVFKPN
AYEERALLRGVYFTSGTQEGSPIDRLIGAMAQSMGLDRQHLARQSGSGRSYFIEKLFNAV
AFAERGLVGVNPKVERRRKWLARGALAASIALVVLVGTLWAVSYRANQAYIAQVEHKLAP
LGQTLQTLSPAQRDVLAVLPLLNAVRHLAEDPPSWAEGLGLYQGDMLEAESASVYRKLLI
AVFAPRLVTRIEEQLHSGGGSDFLYEGLKAYLMLADGEHYDPDFIKAWVTLDWEQSLPRD
LAPEQRAALGEHLQALFAKRPPNARLDANLIEDLRRQLQQLPVAQRVYDRVKRQKLPDGV
SDFRLSEAAGRDAALVFSRKSGKPLGEPLSGLFTVEGYRKAFLATSLQHSNTLAEERWVL
GREQADEGDVSSLAADVRRLYFADYIRHWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLGAVAKETNLQQQDPLAAAQAKAGEAGVDQLKQRLGNLLGQDAPADSRQAQQTEDP
VTAHFAELASLVSKGEGEPAAIDGLLTDMNALYVQVSAMVGASGDALLGEAKNQATAAAN
RVSLTAQRQPPMVQGLVKSVVTSTTNTMMGGVRNQLNAAWVSEVVNVYRQSLSGRYPLAP
GSSRDATLDDFGQFFGVGGVMDSYFRKYLQPYVDTSTNPWRWQPGAAQKLGIGPGVLHTF
QRSAAIRDAFFRSGGLQPTVRFELKPVAMDASITQFLLDLDGQQISYDHGPSRPVAMQWP
NPNSIGVVRLSIMPPSATGRSGLTLEGPWAWFRLLDQSDLVAGNGPDRFSLRLRVDGASV
SYELRANSAFNPFKSRVLSGFSLPERL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcggttttgtcgttcgctgggtgatcccgctgctgggcttgatcgcc
ctgagcctgatcatctggttcatcggcccgctgtgggacgtgctggtcccggcggggcgc
cgctgggccctgatcgcgctgctgtttgcggcgtggatcggttatcgcctgtggcgcttc
atccaggcccgccgccaggcggcagaagtcatgcgcagcctggccgcagaaaccgccccg
gaccctgccagcgttgccaccgctgaagaactggccaccctgcgccagcgcatggacgag
gccctggcactgctgaaaaaggcccgtcttggcggtgatgagcggcgcaatctgtatgag
ctgccgtggtacgtgatcatcggcccgccgggctcgggcaagaccaccgcactggtcaac
tccggcctgcattttccgctcgcggcgcagcttggcgccggggcgattcgcggtgttggc
ggcacccgcaactgcgactggtggtttaccgaccaggctgtgctgctggataccgctggg
cgctacaccacccaggacagccatgcccaggtcgacaaggcggcctggctgggtttcctt
gacctgctgaagaagcagcgcgcgcgccggccgatcgacggcgccttcatcgccatcagt
ctgtccgacctgctgctgggcagcgacgcggaacgtgccgcccatgcggcggccattcgc
tcgcgtatccaggagctgtacagccagctgggcgtgcgctttccgatctacctgatgctg
accaagctcgacctggtgccgggcttcatggagttcttcgacacgctgagcaaggaagag
cgcgcccaagtgtggggcatgacctttgccctggacgacgaccagtcggccgaagggccg
ctggcgcagttccagagcgagtttgccggccttgagcagcgcctcaacgcacgcttggtc
gaacgcctgcagcaggagcgggatccggcgcggcgcgatctggtctacggctttgtccag
cagttcgccgccttgcgttcgaatctgcagagcttcctcgacggcgtgttcaagcccaat
gcctatgaagagcgcgcactgttgcgtggcgtgtacttcaccagcggcacccaggaaggc
agcccgatcgaccgcctgatcggcgccatggcccaaagcatgggcctggaccgccagcac
ctggcgcgccagagcggcagcgggcgcagctatttcatcgaaaaactgttcaacgccgtg
gcctttgccgagcgcggcctggttggggtcaacccgaaggtcgagcgccggcgcaaatgg
ctggcccgtggcgcactcgctgccagcattgccctggtagtgctggtcggcaccttgtgg
gcggtgagctatcgcgccaaccaggcctacattgcccaggtcgaacacaagctcgcgccc
ctggggcaaaccttgcaaaccctgagcccggcccagcgtgatgtgttggcagtgctgccg
ctgctcaatgccgtgcgccacctggccgaagatccgcccagctgggccgagggcctgggg
ctgtaccagggcgacatgcttgaggccgaatcggccagcgtctaccgcaagttgctgatt
gccgtgttcgccccgcgcctggtcacccgcatcgaagagcaactgcacagtggcggcggt
tcggacttcctctacgaaggcctcaaggcttacctgatgctggccgatggcgagcattac
gacccggacttcatcaaggcctgggtcaccctcgactgggagcaaagcctgccccgtgac
ttggccccagagcagcgtgctgcgctgggtgagcacctgcaggcgctgtttgcaaaacgg
ccgccgaatgcacgcctggatgccaacctgatcgaagacttgcgtcgccaactgcagcaa
ctgccggtggcccagcgcgtctatgaccgggtcaagcgccagaagctgccagacggcgtc
agcgattttcgcctgagcgaagccgctggccgcgatgctgcgctggtgttcagccgcaag
agcggcaagccgttgggcgagcctttgagcgggctgttcaccgtcgaggggtatcgcaag
gcgttcctcgctaccagtctgcagcacagcaacaccctggccgaagagcgctgggtgctg
ggccgcgaacaagccgatgaaggcgatgtcagcagcctggccgccgatgtgcgccgcctg
tatttcgccgactacatccgccactgggacgcgctgctggccgatatcgacttcgtgccg
atcaccagcgtggcccaggctgccgatgtattgcgggtgatttccgggccgacttcgccg
ctgaaaaaactgcttggcgcagtcgccaaggaaaccaacctgcaacagcaggacccgctt
gccgccgcccaggccaaggctggcgaagccggtgtcgatcagctcaagcaacgcctgggc
aacctgctgggccaggatgcaccggcagatagccgccaggcgcagcaaactgaagacccg
gtcaccgcgcactttgccgaactggccagcctggtcagcaagggcgagggcgagccggca
gccatcgacggcctgctcaccgacatgaacgccttgtacgtgcaggtcagcgctatggtc
ggtgccagcggcgatgccttgctcggcgaagccaagaaccaggccactgccgccgccaac
cgcgtcagcctcaccgcccaacgccagccgccgatggttcagggcctggtcaaatcggtg
gtgacttcgaccaccaacaccatgatgggcggcgtgcgcaaccaactcaacgccgcttgg
gtcagcgaggtggtcaacgtttaccgccagtccctgagcggtcgttacccgttggcgccg
ggcagctcgagggacgccaccctggatgacttcggccagtttttcggcgtcggcggggtg
atggacagctatttccgcaaatacctgcagccgtacgtcgatacctcgaccaacccctgg
cgctggcagccgggcgcggcgcagaagcttggcatcggccctggcgtgctgcacaccttc
cagcgctcggccgcgattcgggatgcgttcttccgctctggcggcctgcagccgaccgtg
cgcttcgagctcaagccggtggccatggacgcctcgatcacccagttcctgcttgatctc
gacggccagcagatcagctacgaccatggccccagccgcccggtagcgatgcagtggccg
aaccccaacagcatcggcgtggtgcgcctgtcgatcatgccgccgtctgccacgggccgt
tcagggttgaccctggaagggccgtgggcctggttccgcctgctcgaccagtcggacctg
gtggctggcaacggcccggatcgtttcagcctgcgcctgcgcgtcgatggtgccagcgtg
tcttacgagttgcgtgccaatagcgccttcaacccgttcaagagccgcgtgctcagcggt
ttcagcctgccggagcggctgtga
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