Pseudomonas donghuensis: BV82_1747
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Entry
BV82_1747 CDS
T07361
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw00541
Biosynthesis of various nucleotide sugars
pdw01100
Metabolic pathways
pdw01250
Biosynthesis of nucleotide sugars
Module
pdw_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BV82_1747 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pdw01005
]
BV82_1747 (rfaD)
Enzymes [BR:
pdw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
BV82_1747 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pdw01005
]
Core region
BV82_1747 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Ldh_1_N
DapB_N
KR
DUF6716
Motif
Other DBs
NCBI-ProteinID:
KDO00207
UniProt:
A0AAP0XBI4
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Position
complement(5431486..5432478)
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AA seq
330 aa
AA seq
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MTIIVTGAAGFIGSNLVQALNQRGETDIIAVDDLSDGDKFRNLADGEIADYLDKDDFLQR
FGRGQFGKVRAVLHQGACSSTVEGDGRFMMDNNYRYSRDLLDAAQGLQVPLLYASSAAVY
GAGRDFREQRECERPLNVYGYSKFLFDQRVRRQLAQARSQIVGLRYFNVYGPHEQHKGAM
ASVALHCFKQYQADGKVSLFGSYGDYPSGAHLRDFVAVEDVVRVNLFFLDRPQVSGLFNV
GSGRAQPFNDVALAVINRLREQQDQPPLSLEMALLEGILEYSEFPEHLRGKYQCYTCADL
ERLRSVGYQQPTLTVEQGVARYCDWLQRAP
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaccattatcgtcaccggcgccgccggttttatcggtagcaacctggtccaggccctc
aatcagcgcggcgaaaccgacatcatcgcggtcgatgacttgagcgatggcgacaagttt
cgcaacctggctgacggcgaaatcgccgactacctggacaaggacgattttcttcagcgt
tttggtcgtggccagttcggcaaggtacgcgccgtgctgcaccagggcgcttgctccagc
accgtcgaaggcgacgggcgcttcatgatggacaacaactaccgctacagccgcgacctg
ctcgacgccgcccaaggcctgcaggtgccgttgctgtatgcctcgtcggcagcggtgtat
ggcgccgggcgcgactttcgtgaacagcgtgaatgcgagcggcccttgaacgtttacggc
tactcgaagtttctcttcgaccagcgcgtgcgtcggcaactggcccaagcacgcagccag
atcgtcggcctgcgttacttcaacgtctacggcccccacgaacagcacaaaggcgccatg
gcctcggtggccttgcactgcttcaagcagtatcaggccgacggcaaggtcagcctgttc
ggcagctatggcgactaccccagcggcgctcacctgcgcgatttcgtggcggtcgaggat
gtggtcagggtcaacctgttcttcctcgaccggccgcaggtgagtggcctcttcaacgtc
ggcagcggccgcgcccagccattcaatgacgtggcactggcggtgatcaaccgcctgcgc
gagcagcaggaccagccgccgctgtcgctggagatggccctgctggaaggcattcttgaa
tacagcgaattccccgagcacctgcgcggcaagtaccagtgttacacctgcgccgacctt
gagcgcttgcgcagcgttggctatcagcagccaacgctgacggtggagcagggggtggcg
cgttactgcgactggttgcagcgcgcaccgtag
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