Pseudomonas donghuensis: BV82_1816
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Entry
BV82_1816 CDS
T07361
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw00260
Glycine, serine and threonine metabolism
pdw00460
Cyanoamino acid metabolism
pdw00630
Glyoxylate and dicarboxylate metabolism
pdw00670
One carbon pool by folate
pdw00680
Methane metabolism
pdw01100
Metabolic pathways
pdw01110
Biosynthesis of secondary metabolites
pdw01120
Microbial metabolism in diverse environments
pdw01200
Carbon metabolism
pdw01230
Biosynthesis of amino acids
pdw01240
Biosynthesis of cofactors
pdw04981
Folate transport and metabolism
Module
pdw_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BV82_1816
09102 Energy metabolism
00680 Methane metabolism
BV82_1816
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BV82_1816
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BV82_1816
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BV82_1816
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BV82_1816
Enzymes [BR:
pdw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BV82_1816
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
KDO00274
UniProt:
A0AAP0XFQ9
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All DBs
Position
complement(5366181..5367434)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAINAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEQLAIDRAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTSTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRQIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LARSNEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKTYQQQVIDNAQAMAE
VFVKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTSRGFKVSQCVELAGWICDILDNLGDADVEADVAKNVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggcgatcaat
gccgaagagcaacgccaggaagatcacatcgagttgatcgcctcggaaaactacaccagc
aagcgtgtcatgcaggcccagggcagcggcctgaccaataaatacgccgaaggctacccg
ggcaagcgctattacggcggttgcgagcatgtggataaagtcgagcaactggccatcgac
cgcgccaagcagttgttcggcgccgattacgccaacgtccaaccgcattccggctcctcg
gccaacagcgccgtgtacctggccctgctgcaggctggcgacaccattctgggcatgagc
ctggcccacggcggccatctgacccacggtgccaaggtgtcgtcctcgggcaagctgtac
aacgccgtgcagtacggcatcgacaccagcaccgggctgatcgactacgacgaagtcgag
cgcctggcggttgagcacaagccgaagatgatcgtcgccgggttctcggcctactcgaaa
accctcgatttcccacgctttcgtcagattgccgacaaagtcggtgcctacctgttcgtc
gacatggctcacgttgccggtctggtggccgctggcctgtaccccaacccgctgccgtac
gctgacgtggtcaccaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatc
ctggcgcgcagcaacgaagagatcgagaaaaaactcaacgccgctgtattccccggcgcc
cagggcggcccgctgatgcacgtgatcgctgccaaggcggtgtgcttcaaggaagcgctg
gagcctggcttcaagacctatcagcagcaagtgatcgacaacgcccaggccatggccgag
gtgttcgtcaagcgtggctatgacgtggtctccggcggtaccgacaaccacctgttcctg
gtcagcctgattcgccagggcctgaccggtaaagatgccgacgccgccctgggccgcgcc
cacatcaccgtcaacaagaacgccgtgcccaacgacccacagtcgccgttcgtcacctcc
ggcctgcggatcggcaccccggcggtcaccagccgcggcttcaaggtcagccagtgcgtg
gaactggctggttggatctgcgacatcctcgataacctcggtgatgccgatgtcgaggcc
gatgttgcgaagaacgtgtcggcactctgtgcagattttccggtttaccgctga
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