Pseudomonas donghuensis: BV82_2244
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Entry
BV82_2244 CDS
T07361
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw03420
Nucleotide excision repair
pdw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BV82_2244 (uvrD)
03430 Mismatch repair
BV82_2244 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdw03400
]
BV82_2244 (uvrD)
Enzymes [BR:
pdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BV82_2244 (uvrD)
DNA repair and recombination proteins [BR:
pdw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BV82_2244 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BV82_2244 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
KDN99831
UniProt:
A0AAP0XB69
LinkDB
All DBs
Position
97452..99635
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVVQASPHSIL
SVTFTNKAAAEMRQRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLNQNFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLGTMRSIYEAYE
TACQRAGVIDFSELLLRALDLWRDHPGLLEHYQRRFRHVLVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIHQYTADFPDAELIRLEQNYRSTAGILKAANALIA
NNSGRLGKELWTDGGDGEPLSLYAAFNEHDEARYVVESIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPPRGI
GEKTVEAIREHARHAQVSMWESMSLLIANKALKGRAASALGAFMEMIENLAAKVMEMPLH
LMTQTVIEQSGLIVYHQEEKGEKGQARVENLEELVSAARNFENSEEDAELSPLAAFLGHA
SLEAGDAQADEHEDSIQLMTLHSAKGLEFPHVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQQLVMTYAETRRLYGSETYNKVSRFVREIPAGLVQEVRLSNSVSRPFSSGQ
QQNSSSLFANANIPQTAFNLGQRVQHAVFGEGVILNFEGSGAQARVQVNFAEGSKWLMLG
YAKLEAL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctctcctgttgaactctctcaacgacgcccaacgccaggctgta
gctgcgccggtcggtcgtcagttggtcctggccggtgccggctccggcaagacccgtgtg
ctggtgcaccgcatcgcctggttgatccaggtcgtgcaggcctcgccgcactcgatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgccagcgtatcgaacagctgatg
ggcatcaacccggccggcatgtgggtaggcaccttccacggcctggcgcaccgcctgttg
cgcgcgcactggcaagaggcggggctgaaccagaacttccagatcctcgacagcgacgac
cagcagcgcctggtcaagcgggtgatccgcgagctgggcctggatgaacaacgctggccg
gcgcgccaggcacaatggttcatcaacgggcagaaagacgaaggcctgcgcccgcaacac
atccaggccagcggcgacctgttcctgggcaccatgcgcagcatctatgaagcctacgag
accgcctgccagcgcgccggcgtcatcgacttctccgagctgctgctgcgcgccctggac
ctgtggcgtgaccaccctggcctgctcgagcactaccagcggcgcttccgccatgtgctg
gtcgacgaattccaggataccaacgccgtgcagtacgcctggctgcggctgctggccaag
ggcggtgacagcctgatggtggtcggcgacgacgaccagtcgatttatggctggcgtggc
gccaagatcgagaacatccatcagtacactgccgacttccctgacgccgagctgatccgc
ctggagcagaactaccgctccaccgccggtatcctcaaggcggccaacgccctgatcgcc
aacaacagcgggcgcctgggcaaagagctgtggaccgacggtggcgatggcgaaccgctg
agcctgtacgccgccttcaacgagcacgacgaagcccgctacgtggtcgagagcatcgaa
agcgcgctcaagaccggcctggcccgcagcgatattgccatcctgtatcgctccaacgcc
cagtcgcgggtgcttgaagaagcactgctgcgcgaacgtattccttaccgcatctatggc
ggccagcgcttcttcgagcgtgccgagatcaagaacgccatggcctacctgcgcctgctc
gaaggccgcggcaacgacgccgcccttgagcgggtgatcaacgtgccgccgcgcggcatc
ggtgagaagaccgtcgaagcgattcgcgaacacgcccgccacgcccaggtctcgatgtgg
gagtcgatgagcctgctgatcgccaacaaggcgctcaagggccgcgctgccagcgccctg
ggcgcgttcatggaaatgatcgagaacctcgccgccaaggtcatggaaatgcccctgcac
ctgatgacccagacggtcatcgagcagtccgggctgatcgtctatcaccaggaagaaaaa
ggcgaaaaaggccaggcccgggtagagaaccttgaggaactggtcagcgccgcgcgcaac
ttcgaaaacagcgaagaagacgccgaactgtcgccattggcggccttcctcggccacgcc
tcgctggaagccggcgacgcccaggccgacgagcacgaagacagcatccagctgatgacc
ctgcacagtgccaagggcctggaattccctcacgtattcctggtcggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagaacccggccgccttgaagaggagcgccgcctg
gcctacgtcggcatcacccgcgccatgcagcaactggtgatgacctatgccgagactcgc
cggctgtatggcagcgagacctacaacaaggtctcgcgcttcgtacgcgaaattccggca
ggcctggttcaggaagtgcgcctgtccaacagcgtcagccgcccgttcagctccggccag
cagcagaactcgagcagcctgtttgccaacgccaacattccgcagaccgccttcaacctg
ggtcagcgtgtgcaacatgcggtgttcggcgaaggggtgatcctcaacttcgagggttcc
ggcgctcaggcccgggtccaggtcaacttcgccgaaggcagcaagtggctgatgcttggc
tacgccaagctcgaggccctgtaa
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integrated database retrieval system
