KEGG   Pseudomonas donghuensis: BV82_2366
Entry
BV82_2366         CDS       T07361                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pdw  Pseudomonas donghuensis
Pathway
pdw03030  DNA replication
pdw03410  Base excision repair
pdw03420  Nucleotide excision repair
pdw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pdw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BV82_2366 (polA)
   03410 Base excision repair
    BV82_2366 (polA)
   03420 Nucleotide excision repair
    BV82_2366 (polA)
   03440 Homologous recombination
    BV82_2366 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdw03032]
    BV82_2366 (polA)
   03400 DNA repair and recombination proteins [BR:pdw03400]
    BV82_2366 (polA)
Enzymes [BR:pdw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BV82_2366 (polA)
DNA replication proteins [BR:pdw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BV82_2366 (polA)
DNA repair and recombination proteins [BR:pdw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BV82_2366 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BV82_2366 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 DnaA_N Obc1_cap
Other DBs
NCBI-ProteinID: KDN99953
UniProt: A0AAP0XDY6
LinkDB
Position
224234..226996
AA seq 920 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSLFAVVFD
AKGGTFRDEMFAEYKANRPSMPDDLRVQIEPLHASVRALGYPLLCVEGVEADDVIGTLAR
SSAAAGRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLALM
GDKVDNIPGVPGVGEKTAVGLLTGIGGGLSDLYQNLDKVPALAIRGAKTLPAKLEEHRDA
AFLSYELATIKIDVPLDVEVEALVCGEPDRDALLALYTEMEFKSWIDEVQRDAKRAGQDV
AVQAPQEVVEAQYETILDQARFDAWLEKLRQARLFAFDTETTGLDAQQAQLVGVSFAVQA
HEGAYVPLTHSYMGVPEQLDRDSVLLALKPLLEDPAKVKVAQNAKYDMNILANCAIGGDF
ANGIQMQGVAYDTMLESYVLDSTATRHDMDSLALKYLNHTTIGFTDIAGKGAKQLTFDQI
TLEQAGPYAAEDADVTLRLHQTLQQKLALIPSLQAVLSDIEMPLVPVLAKIERQGALVDA
KLLGVQSVELGEKMLELERQAFEIAGEEFNLGSPKQLGVILYDKLGMPVLNKTAKGQAST
AEAVLAELADMDFPLPKVLMQYRSLSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAATGR
LSSSDPNLQNIPIRTAEGRRIRQAFVAAPGYQLLAADYSQIELRIMAHLAQDEGLLHAFR
NDLDVHRATAAEVFGVELEQVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAYI
DRYFARYPGVLAYMERTRAQAAEQGYVETLFGRRLYLPEINAKNPALRKGAERTAINAPM
QGTAADIIKRAMVAVDNWLTASGLDARVILQVHDELVLEVREDLVEQVREQIRPHMSGAA
QLDVPLLVEVGVGANWDEAH
NT seq 2763 nt   +upstreamnt  +downstreamnt
atgagccaagctcccctcgtcctggtggacggttcctcgtacctgtaccgcgcctttcac
gcgctgccaccactgactacctccaagggcctgccgaccggcgcggtcaagggcgtgctg
aacatgctcaagagcctgcgcaagcagtatccggacagcctgttcgcggtggtcttcgac
gccaagggcggcacctttcgcgacgaaatgttcgccgagtacaaggccaaccggccgagc
atgcccgacgacctgcgggtgcagatcgagccgctgcacgccagcgtgcgtgccctgggc
tacccgctgctgtgtgtcgaaggcgtggaagccgacgacgttatcggcactctggcccgc
agcagcgccgccgccgggcgtccggtgatcatctccacgggcgacaaggacatggcgcag
ttggtcgacggccacattacgctggtcaacaccatgaccggtagcgtgctcgacgtggct
ggcgtacacgagaaattcggcgtcggtcctgaacacatcatcgatttccttgccctgatg
ggcgacaaggtcgacaacatcccgggcgtgccgggggtgggcgaaaagactgcggtgggc
ctgctgaccggaatcggcgggggcctgagcgacctgtaccagaatctcgacaaggttccg
gcgctggccattcgcggcgccaagaccctgccggcgaagcttgaagagcaccgtgacgcg
gcgtttctgtcctatgagctggccaccatcaagatcgacgtgccgctggacgttgaagtc
gaagcgctggtctgcggcgagccggaccgtgacgcgctgctggcgctgtacaccgaaatg
gaattcaagagctggatcgacgaagttcagcgcgatgccaagcgcgctggccaggacgtc
gcggtccaagcgccgcaggaagtggtcgaggcccagtacgaaaccatcctcgaccaggcc
cgattcgatgcctggctggagaagctgcgccaggcacggctgttcgcgttcgacaccgaa
accactggcctcgatgcccagcaggcgcaactggtgggtgtgtcgttcgccgttcaggcc
catgaaggcgcttacgtgccgctgacccattcctacatgggggtgcccgagcagctcgat
cgcgacagcgtgttgctggcgctcaagccgttgctggaagacccggccaaggtcaaggtg
gcgcagaacgccaagtacgacatgaacatcctggccaactgcgccatcggtggggacttt
gccaacggcatccagatgcagggcgtggcctacgacaccatgctcgagtcctacgtgctc
gactccactgccacccgtcatgacatggacagcctggcgctcaagtacctgaaccacacc
accatcggctttaccgacatcgccggcaaaggtgccaagcagctgaccttcgaccagatc
accctggagcaggccggcccttatgccgccgaagacgccgacgtcaccctgcgcctgcac
cagaccctgcagcagaagcttgcgctgattccgagcctgcaagcggtgctcagcgacatc
gaaatgccgctggtgccggtgctggccaagatcgagcgccagggcgcgctggtcgatgcc
aaactgctgggcgtgcagagcgtggagctgggcgagaagatgctcgagctggagcgccag
gcgttcgagatcgccggtgaggagttcaacctcggttcgcccaagcagttgggcgtgatc
ctctacgacaagctgggcatgccagtgctcaacaagaccgccaagggccaggcttccacc
gccgaagcggtgctggcggaactggccgacatggacttcccgctgcccaaggtgctgatg
cagtaccgctccctgagcaagctcaagagcacctacaccgatcgcctgccggaacagatc
aacccgcgcaccgggcggatccacacctcctaccatcaggcggtggcggcgaccggacgc
ctgtcgtccagcgacccgaacctgcagaacattccgatccgcaccgccgaaggccggcgc
atccgtcaggcctttgtcgccgcaccgggctaccaactgctggcggcggactattcgcag
atcgagctgcggatcatggcccacctggcccaggacgaaggcctgctgcacgcctttcgc
aacgacctggacgtgcaccgcgccaccgctgccgaagtgttcggcgttgagctggaacag
gtcactaccgaccagcggcgtagcgccaaggccatcaacttcggcctgatctacggcatg
agcgcctttggcctggccaagcagatcggcgtcgaccgcaaacagtcccaggcctacatc
gatcgttacttcgcccgctacccaggcgtactggcctacatggaacgcacccgcgcccag
gctgccgagcaaggctatgtcgagaccctgtttggccggcgcttgtacctgccggagatc
aacgccaagaacccggccctgcgcaaaggcgccgagcgcactgcaatcaacgcgccgatg
cagggcactgccgccgatatcatcaagcgcgccatggtcgctgtggacaactggctgact
gcttcgggcctggatgcccgggtgatcctccaggtacacgacgaactggtgctggaggtg
cgcgaagacctggtcgagcaggtgcgtgagcaaattcgtccacacatgagcggcgctgcc
cagttggatgttccgctgctggttgaggtcggagtgggggcaaattgggacgaagcgcac
taa

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