Pseudomonas donghuensis: BV82_2446
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Entry
BV82_2446 CDS
T07361
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw00250
Alanine, aspartate and glutamate metabolism
pdw00310
Lysine degradation
pdw00350
Tyrosine metabolism
pdw00650
Butanoate metabolism
pdw00760
Nicotinate and nicotinamide metabolism
pdw01100
Metabolic pathways
pdw01120
Microbial metabolism in diverse environments
Module
pdw_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BV82_2446 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BV82_2446 (gabD)
00310 Lysine degradation
BV82_2446 (gabD)
00350 Tyrosine metabolism
BV82_2446 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BV82_2446 (gabD)
Enzymes [BR:
pdw01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BV82_2446 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BV82_2446 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BV82_2446 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
KDN99236
UniProt:
A0AAP0SFU9
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Position
330166..331608
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AA seq
480 aa
AA seq
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MQLKDAQLFRQQAFINGEWLDADNGQTIKVNNPATGEIIGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERAGKLRRWFELMIEHQDDLARLMTTEQGKPLAEAKGEIVYAASFIEWFA
EEAKRVYGDTIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPYSALALVELATRAGIPAGVLSVVTGSAGDIGSELTGNPIVRKLSFTGSTEIGRQ
LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVDGAIISKYRNNGQTCVCANRIYVQDG
VYDAFAEKLKAAVAKLKIGNGLEDGTTTGPLIDEKAVAKVQEHIADAVGKGAQVLTGGKL
IEGNFFEPTVLVNVPNNAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARD
MSRVFRVAEALEYGMVGINTGLISNEVSPFGGIKASGLGREGSKYGIEDYLEIKYLCISI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagacgcccagttgttccgccagcaagccttcatcaatggagagtggctg
gacgcggacaacggccagacgatcaaggtcaacaacccggcaacgggcgagatcatcggc
actgtgccgaagatgggcgccgctgaaacccgccgtgccatcgaggccgccgacaaggcg
ctgccggcctggcgcgcgctgaccgccaaagaacgtgctggcaagctgcgtcgctggttc
gagctgatgatcgagcaccaggacgacctggcccgcctgatgaccaccgagcagggcaag
ccactggccgaagccaagggcgagatcgtctacgccgcttcctttatcgagtggttcgct
gaagaagccaagcgcgtctacggcgacaccatcccgggtcaccagccagacaagcgcctg
atcgtgatcaagcagccgatcggcgtgaccgcggccattaccccgtggaacttcccggcg
gcgatgatcacccgtaaagccggcccggccctggccgctggctgcaccatggtgctcaag
cctgcttcgcaaaccccgtactcggccctggccctggttgagctggccacccgtgccggt
atcccggctggcgtgctgagcgtggtgaccggcagcgccggcgacatcggcagcgagctg
accggcaacccgatcgtgcgcaagctgtcgttcaccggctccaccgagatcggtcgccag
ctgatggccgaatgcgccaaggacatcaagaaggtttccctggagctgggcggcaacgcg
ccgttcatcgtgtttgacgacgcagacctggataaggccgtcgacggcgcgatcatctcc
aagtaccgcaacaacggccagacctgcgtctgcgccaaccgtatctacgtgcaggacggc
gtctacgatgccttcgccgagaagctcaaggccgctgtggccaagctgaagatcggcaac
ggcctggaagacggcaccaccaccggcccgctgatcgacgaaaaagccgtggccaaggtc
caggagcacattgccgatgcagttggcaaaggcgcccaggtactgaccggcggcaagttg
atcgaaggtaacttcttcgagccgaccgtgctggtcaacgtgccaaacaacgcagcggtg
gccaaggaagaaaccttcggcccgctggcgccactgttccgtttcaaggacgaggccgaa
gtcatcgccatgtccaacgacaccgagttcggtctggcctcgtacttctatgcccgtgac
atgagccgtgtgttccgtgtcgccgaagccctggaatacggcatggtcggtatcaacacc
ggtctgatctccaacgaagtctcgccgttcggcggtatcaaggcctcgggcctgggccgc
gaaggttccaagtacggcattgaggactacctggaaatcaaatacctgtgcatcagcatc
tga
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