Pseudomonas donghuensis: BV82_3910
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Entry
BV82_3910 CDS
T07361
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw00071
Fatty acid degradation
pdw00280
Valine, leucine and isoleucine degradation
pdw00310
Lysine degradation
pdw00362
Benzoate degradation
pdw00380
Tryptophan metabolism
pdw00410
beta-Alanine metabolism
pdw00640
Propanoate metabolism
pdw00650
Butanoate metabolism
pdw00907
Pinene, camphor and geraniol degradation
pdw00930
Caprolactam degradation
pdw01100
Metabolic pathways
pdw01110
Biosynthesis of secondary metabolites
pdw01120
Microbial metabolism in diverse environments
pdw01200
Carbon metabolism
pdw01212
Fatty acid metabolism
Module
pdw_M00087
beta-Oxidation
pdw_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
BV82_3910 (fadB)
00650 Butanoate metabolism
BV82_3910 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
BV82_3910 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
BV82_3910 (fadB)
00310 Lysine degradation
BV82_3910 (fadB)
00380 Tryptophan metabolism
BV82_3910 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
BV82_3910 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
BV82_3910 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BV82_3910 (fadB)
00930 Caprolactam degradation
BV82_3910 (fadB)
Enzymes [BR:
pdw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
BV82_3910 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
BV82_3910 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
BV82_3910 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
BV82_3910 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
KDN98285
UniProt:
A0AAP0SCY3
LinkDB
All DBs
Position
complement(3972713..3974860)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLAVPTVAAINGIALGGGLE
MCLAADYRVMATSAKIGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVTPELLQAAALDLIKRAISGELDHKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTSVAESLIGLFLNDQEL
KRKAKAHDEIARDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDINESAIQLGLNEASKL
LGKRVEKGRLTPAKMAEALNAIRPTLSYGDFGNVDIVVEAVVENPKVKQAVLAEVEGQVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYETDKRGKP
KKVADAAVLDVLKPIVYEQREVSDEDIINWMMIPLCLETVRCLEDGIVDTAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgtcttaccctgaacgaattg
cgtcaggccgtagacaccatcaaagccgacgcatcgatcaaaggcgtgattgtcagcagt
ggcaaggacgtattcatcgtcggcgcggacatcaccgagtttgtcgataacttcaagttg
cccgaggccgaactggtcgccggcaacctggaagccaaccggattttcagcgatttcgaa
gacctggccgtgccgaccgttgccgcaatcaatggcatcgccctgggcggcggtctggaa
atgtgcctggctgccgactaccgcgtcatggccaccagcgccaagatcggcctgccggaa
gtcaagctgggcatctacccgggcttcggcggtaccgtgcgcctgccgcgtatcatcggt
gccgacaacgccatcgagtggattgccgccggcaaggaaaaccgtgctgaagacgcgctg
aaagtcggcgccgtcgatgccgtggtaacccctgagctgttgcaggctgcggcccttgac
ctgatcaagcgcgccatcagcggcgagctcgaccacaaggccaagcgccagccaaaactg
gaaaaactcaagctcaacgccatcgagcagatgatgtcgttcgaaaccgccaagggtttc
gtcgccggtcaagctggcccgaactacccggcgccggtcgaagcgatcaagagcatccag
aaggccgccaacttcggtcgtgacaaggccctggaagtcgaagccgcaggcttcgtcaaa
ctggccaagacctcggttgccgagagcctgatcggcctgttcctcaacgaccaggaactc
aagcgcaaagccaaggcccacgacgaaatcgcgcgcgacgtgaagcaggctgccgtgctc
ggcgccggcatcatggggggtggcatcgcctaccagtcggcggtcaagggcaccccgatc
ctgatgaaggacatcaacgaaagcgccatccagctgggcctgaacgaagcctccaagctg
ctcggcaagcgcgttgaaaaaggccgcctgaccccggcgaaaatggccgaagcgctgaac
gcgattcgcccgaccctgtcctacggcgattttggcaacgtcgacatcgtcgtcgaagcc
gtggtcgagaacccgaaggtcaagcaagcagtgctggctgaagtggaaggccaggtcaag
gaagacgcgatcctggcgtccaacacctcgaccatttccatcaacctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaagtcatccgtggcgagaagtccagcgaagtggcggttgccaccaccgtggcc
tatgccaagaagatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtactgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtcgac
ttcgtgcgcatcgacaagatcatggaaaaattcggctggccaatgggcccggcctacctg
atggacgtggtcggtatcgacaccggccatcacggccgtgacgtcatggccgaaggcttc
ccggaccgcatgaaggacgaccgtcgttcggccatcgacgtgctctacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaagtcgctgacgcggcagtcctcgacgtgctcaagccgatcgtttacgagcaacgt
gaagtcagcgacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtt
cgctgcctggaagacggtatcgtcgacaccgccgccgaagccgacatgggcctggtctac
ggtattggtttccctcctttccgtggcggcgcgctgcgttacatcgactcgatcggtgta
gccgaattcgttgccctggccgacaaatacgccgatctgggtccgctgtatcaccccacc
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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