Pseudomonas donghuensis: BV82_3986
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Entry
BV82_3986 CDS
T07361
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pdw
Pseudomonas donghuensis
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdw03400
]
BV82_3986
DNA repair and recombination proteins [BR:
pdw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BV82_3986
Archaeal homologous recombinant proteins
BV82_3986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
AAA_15
nSTAND3
MMR_HSR1
cobW
AAA_22
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
KDN98103
LinkDB
All DBs
Position
4066562..4070209
Genome browser
AA seq
1215 aa
AA seq
DB search
MKILAIRLKNLASLEGPIEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNIGRETKLPDLDSDILTSDPRTLLRRGSGSGFAEVDFVGIDGRRYRARWETNRARDKA
NGKLQGSRQSLHDLDSDQLLSNQSKAEYKQLIESRLGLNFEQFTRAVMLAQSEFSAFLKA
DDKERSELLEKLTNTAIYSQLGRRAYSKSKEAEEAHKALLDQASGVMPMAAEARAELDQR
YSGALDRFKTEQAQLRQLEQQRSWLTELLQLQEQVQTSTAQLHSAQQHNDSLHSERLKLA
RLEQLAPQRHQFARQQALNAQLSPLAMSIAAQRQQHDLLHGHQQQLQDDLGKAHAALAQA
LAQQTDSAPSVRQAFAEQNTLARLHQELANSATLKHQAEQASAEGQQQLLTLDEQQRLSE
QRLQQIGQQLEQSAPLAGLSEAWSAYRDRLQQLMQLGNRLNQGHAELPGLQERASQASAQ
LEEQRAALALLYREAEAEPQALAEQIGLLGELLQKNRQQQRQVEELSRLWSNQQDLEQRL
QALRERQQAALKQREQLISEGLNGKNQLTAAEQALSVTRQLLERQRLARSQSVEDLRAQL
QDDQPCPVCGSQEHPYHQPEALLQSLGRHDQNEEANAQQMVDGLKKQLDELRTQLGGVNG
QIKEYLHQQEQLGNQQHALQPSLEAHPLYPSLADQDASQRSAWLDLQARNLNHDISRDEQ
RQNALLALQKDASRLQQQLQAAQDTSQQANQHLSQQQTALASDQERLEQELASFASLLPG
EILNDLRQEPAAAFMRLDQQLALRLDLLQRQKDEQQEHGERQQTLDKAQLQQQARIQKQE
ELQQQFSELERQHQASRDSLASLLGEQASAEHWQQHLDQAVEQARQAETQAGQQLQETQA
RLIELAAELKAKGERLSALEQEHHEVRGQIEQWRQGHPELDDSGLEQLLALDDNAVAQLR
QELQDSEKAIEQARTLLQERQQRLDQHQAQGNAELTRETLEQAFDSLQVQLTASEQTCAE
LRAAQAEDQRRQLAHQALAEQIATAYSEWQRWARLNALIGSATGDTFRKIAQGYNLDLLV
HHANAQLRQLARRYRLKRGGSLLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLAS
MASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQ
VRRQGNGLSTVEVSG
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccatccgtctgaagaacctggcctcgctggaaggcccgatcgagatc
gacttcaccgccgagccgctggccagcgccggcctgtttgccattaccgggcccaccggc
gccggcaagagtaccctgctcgacgccctgtgcctggcgctgttcggcgccgtgccacgg
ctgaacaacatcggccgcgagaccaagctgccggatctcgacagcgacatcctcaccagc
gacccgcgcaccctgctgcgccggggctcgggcagcggttttgccgaggtggatttcgtc
ggcatcgacggccggcgctaccgcgcccgctgggaaaccaaccgcgcccgcgacaaggcc
aacggcaagctgcaaggcagccgtcagagcctgcatgacctggacagcgaccagctgctg
agcaaccagagcaaggccgaatacaagcaactgatcgagtcgcgcctgggcctgaacttc
gaacagttcacccgcgcggtgatgctggcccagagcgagttcagcgcctttctcaaggcc
gatgacaaagagcgcagcgagctgctggaaaagcttaccaacacggcgatctacagccag
ctgggccgccgcgcctacagcaagagcaaggaagccgaagaggcgcacaaggccctgctg
gaccaggccagcggcgtgatgcctatggccgccgaggcccgcgccgaactcgaccagcgc
tacagcggggccctcgatcggttcaagaccgaacaggcgcaactgcgccagcttgaacag
cagcgcagctggctcaccgagttgctgcaactgcaggaacaggtgcagaccagcacggcg
caactgcacagtgcccagcagcacaacgacagcctgcacagcgagcggctgaaactcgcg
cgcctggaacagctggcgccgcagcgtcaccagtttgcccgccagcaggcgctcaatgcc
cagctcagcccgctggcgatgagcatcgccgcgcagcgccagcagcatgacctgttgcat
ggccaccagcagcaactgcaggacgacctgggcaaggcccacgcggccctcgcccaggcc
ctggcacaacaaaccgacagcgcgccatcggtgcgccaggcctttgccgagcagaacacc
ctcgcccgcctgcaccaggaactggccaacagcgcgacgctcaagcaccaggccgagcag
gccagtgccgagggccagcaacagctgttgaccctcgatgaacagcaacgcctgagcgaa
cagcgcctgcagcagatcggccaacagctggagcaaagcgcgccgctggccgggctgagc
gaagcctggagcgcctatcgcgaccgcctgcagcaactgatgcagctgggcaaccgcctc
aaccagggccacgccgagctgcctggcctgcaggagcgtgccagccaggccagtgcccag
cttgaggagcagcgcgccgccctggccctgctctaccgcgaagccgaggctgaaccccag
gccctggccgaacagatcggcctgctcggcgagctgctgcagaaaaaccgccagcagcag
cgtcaggtcgaagaactgagccggctgtggagcaaccagcaggacctcgaacagcgcctg
caagccttgcgcgagcgccagcaagcggcgttgaagcaacgcgagcagctgatcagcgaa
ggcctcaatggcaagaaccagctgaccgccgccgagcaagcgctaagcgttacccgccag
ttgctcgaacgccaacgcctggcccgcagccagagcgtcgaagacctgcgcgcgcaactg
caagacgaccagccctgcccggtgtgcggtagccaggagcacccttatcaccagcccgaa
gccctgctgcaaagcctcggccgccacgaccagaacgaagaggctaacgcacagcaaatg
gtcgacgggctgaagaaacagctcgatgaactgcgcactcaactgggtggcgtcaacggc
cagatcaaggaatacctgcaccagcaggaacaactgggcaaccagcaacacgcgttgcag
ccaagccttgaagcgcacccgctgtacccgtcgctggccgaccaggacgccagccagcgc
agcgcctggctggacttgcaggcgcgcaacctgaaccacgacatcagtcgtgacgaacag
cgccagaacgccctactggccctgcagaaagacgccagccgcctgcaacagcaattgcag
gcagcccaagataccagtcagcaggccaaccagcacctgagccagcagcaaacggcgctg
gccagtgaccaagagcgcctggagcaggaactggccagtttcgccagcctgttgcctggc
gagatcctcaacgacctgcgccaggagccggctgccgccttcatgcgcctggaccagcaa
ctggccctgcgcctggacctgctgcaacggcaaaaggacgaacagcaggagcacggcgag
cgccagcagaccctggacaaagcccagttgcagcaacaggcacggattcagaagcaggaa
gaactgcaacagcagttcagcgagctggagcgccagcatcaagccagccgcgacagcctt
gccagcctgctcggcgaacaggccagcgccgagcattggcagcagcatctggaccaggcg
gtggagcaagcgcgccaggccgaaacccaggccggccaacagttgcaggagacccaggca
cgcttgatcgaactggccgccgagctcaaggccaagggcgaacgcctgagcgcgctggag
caggaacaccatgaggtgcgcggccagatcgaacaatggcgccagggccacccggagttg
gacgacagcggcctggagcagttgctggcgctcgacgacaacgccgtggcgcaactgcgc
caggagctgcaggacagcgagaaggccatcgaacaggcgcgtaccctgctgcaggagcgc
cagcaacgcctggaccagcatcaggcccagggcaatgccgagctcacccgcgaaacgctg
gaacaggccttcgacagcctgcaggtgcaactgaccgccagcgaacagacctgcgccgaa
ttgcgtgccgcccaggccgaagaccagcgccggcaactggctcaccaggccctggccgag
cagatcgccacagcctacagcgagtggcagcgctgggcacggctcaatgccctgatcggc
tcggccaccggcgataccttccgcaagatcgcccagggctacaacctcgacctgctggtg
caccacgccaacgcccagttgcgccaactggcccggcgctaccggctcaagcgcggtggc
agcctgctcgggctgctggtgctggacacggaaatgggtgacgaactgcgctcggtgcat
tcgctgtcgggcggcgagaccttcctggtctcgctggccctggccctgggcctggcctcg
atggcttcgagcaccctgcgcatcgaatcgctgtttatcgacgaaggcttcggcagcctc
gatccggaatcgctgcaactggccatggacgcgctcgacggcctgcaggcccagggccgc
aaggtcgcggtgatctcccacgtgcaggagatgcacgagcgcatcccggtgcagatccag
gtccgccgccagggtaatggcctgagtaccgtggaggtcagcggatga
DBGET
integrated database retrieval system
