Pseudomonas donghuensis: BV82_4041
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Entry
BV82_4041 CDS
T07361
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BV82_4041 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdw03400
]
BV82_4041 (uvrB)
DNA repair and recombination proteins [BR:
pdw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BV82_4041 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BV82_4041 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
KDN98150
UniProt:
A0AAP0SGQ0
LinkDB
All DBs
Position
complement(4125354..4127369)
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERRDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNEMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVENIAAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAVDGIKVELAQRLEYLHKANKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPDDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAVSPQTIFVSATPGNYEAEHAGRVVEQVVRPTGLVDPQ
VEVRPATTQVDDLLSEIRKRVAVEERVLVTTLTKRMAEDLTDYLADHDVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADNMTGSMQRAIGETERRRDKQIAFNAANGIVPKGVVKDITDIMEGANV
PGSRSKKRKGMAKAAEESARYEAELRSPGEIAKRIKQLEEKMYQLARDLEFEAAAQLRDE
ITALRERMITA
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttccagctcgtcacccgtttccagccggccggcgaccagcccgaggccatt
cgcctgatggtcgaaggaatcgaggcgggccttgcgcaccagaccctgctcggggtgacc
ggctcgggcaagaccttcagcatcgccaacgtgatcgcccaggtgcagcgcccgaccctg
gtgctggcgccgaacaagaccctggcagcgcagctgtacggcgagttcaaggcgttcttc
ccgaacaacgccgtggagtatttcgtttcctattacgactactaccagcctgaagcctac
gtgccgtcctccgacaccttcatcgagaaggacgcctcgatcaacgaccatatcgagcag
atgcgcctgtcggcgaccaaggcgctgctggagcggcgcgatgcgatcatcgtcaccacc
gtttcctgcatctatggcctgggcagcccggaaacctacctgaagatggtcctgcacgtg
gatcgcggcgacaagctcgaccagcgcgcgctgctgcgccgcctggccgacctgcagtac
acccgcaacgagatggactttgcccgcgccactttccgcgtgcgcggtgatgtgatcgac
atcttcccggccgaatcggacctggaagccatccgcatcgagctgttcgatgacgaagtg
gaaaacatcgccgccttcgatccgctgaccggcgaggtgatccgcaagctgccgcgcttc
accttctaccccaagagccactacgtgaccccgcgcgagacgctgctggaggcggtggac
ggtatcaaggtggaactggcccagcgccttgagtacctgcacaaggccaacaagctggtc
gaagcccagcgcctggagcagcgcacccgtttcgacctggagatgatcctcgaactgggg
tactgcaacggcatcgaaaactactcgcgttacctgtccgggcgtccggccggggcgccg
ccaccgaccctttacgactacctgccggacgacgccctgctggtgatcgacgaatcccac
gtcagcgttccgcaagtcggggccatgtacaagggcgaccgctcgcgcaaggaaaccctg
gtcgagtacggttttcgcctgccttcggcgctggacaaccggccgatgcgtttcgatgaa
tgggaggcggtcagcccgcagaccatctttgtctcggcgaccccgggcaactacgaagcc
gaacatgccggccgcgtggttgagcaggtagtgcgcccgaccggcctggtcgacccgcag
gttgaggtgcgcccggccaccacccaggtcgacgatctgctctcggagattcgcaagcgc
gtggcggtggaagagcgggtgctggtgaccaccctgaccaagcgcatggccgaagacctc
accgactacctggccgaccacgacgtgcgcgtgcgctacctgcactcggacatcgacacc
gtcgagcgggtcgagatcatccgcgacctgcgcctgggcaccttcgatgtgctggtgggc
atcaacctgctgcgtgaaggcctggacatgcccgaggtgtcgctggtggcgatcctcgat
gccgacaaggaaggcttcctgcgttccgagcgttcgctgatccagaccatcggccgcgcc
gcgcgtaacctcaatggtcgcgcgatcctctatgccgacaacatgaccggctccatgcag
cgggcgattggcgagaccgagcggcgccgcgacaaacagattgccttcaacgccgccaat
ggcatcgtgcccaagggcgtggtcaaggacatcaccgacatcatggaaggcgccaacgtg
cccggctcgcgcagcaagaagcgcaagggcatggccaaggcggcagaggagagcgcccgt
tacgaagccgagctgcgctcaccgggcgagatcgccaagcgcatcaagcagctggaagag
aagatgtaccagctggcgcgcgacctggagttcgaggcggcggcgcaactgcgcgacgaa
attaccgcgttgcgcgagcgcatgatcacggcgtga
DBGET
integrated database retrieval system
