Pseudomonas donghuensis: BV82_4359
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Entry
BV82_4359 CDS
T07361
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pdw
Pseudomonas donghuensis
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdw03021
]
BV82_4359 (rapA)
Transcription machinery [BR:
pdw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
BV82_4359 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
KDN97500
UniProt:
A0AAP0SB93
LinkDB
All DBs
Position
4449752..4452598
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DQITHFEGWKLTVREVEDVDGLLVYHGLDAQNQARTLPETQLSNFIQFRLASDRLFAGQI
DPLPWFSLRYNTLEHTSRQLQSSLWGLGGTRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLEVALFDAERFIESDA
SNPFEDAQLALVALEWLTEDEKAQDALFAAGWDLLVVDEAHHLVWHEDQVSPEYALVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESEHYRPVAEAVQELLDE
GRLSPQAHATIEGFLGAEGEALLAAVNDGDTQASARLIRELLDRHGTGRVLFRNTRAAVQ
GFPERNLHPYPLPNPDQYMELPLGEHAELYPEVAFQSQGEGSEEERWWRFDPRVDWLIDT
LKMLKRVKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLDRIGQKHTIELHVPHLQNSP
QERLFQWYHQALNAFLNTCPTGNALQHQFGPRLLPLLESGDDDEWQALVDEARAERERLE
AELHSGRDRLLELNSGGAGEGQELVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TSVALIKNKALKPGTVLLELLYVSEVVAPRALQLGRYLPPAALRCLLDTNGNDLASRVSF
ETLNDQLESVPKASANKFIQAQRDVLAPRINSGEAKIMPRHAERVAQAQQRLAAETDEEL
ARLTALQAVNPTVRDSEIEALRKQREQGLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaagccgagctaggt
ctggggaccgttctggcacaggacggccgcttgttgaccgtgctctacccggccactggc
gacacccgccagtactccctgcgcaatgcgcccctgacccgggtgcgcttctcgcctggc
gatcagattacccatttcgagggctggaagctgaccgtgcgcgaggtcgaggacgtcgat
ggcctgttggtctatcacggcctcgatgcccagaatcaggctcgcaccctgccggaaacc
cagctgtcgaacttcatccagttccgcctggccagcgaccgcctgtttgccgggcagatc
gacccgctgccgtggttctcgctgcgctacaacaccctggagcacaccagccgtcagctg
cagtcgtcgctctggggcttgggtggcacccgcgcacaaccgattgcccaccagttgcac
atcgcccgggaagtggccgaccgtatcgctccgcgggtactgctggccgacgaagtgggc
ctgggcaagaccatcgaagcgggcctggtgatccatcgccagctgctgtcgggccgcgcc
agccgcgtgctgatcctggtcccggagaacctgcagcaccagtggctggtggaaatgcgc
cggcgcttcaaccttgaggttgcgctgttcgatgccgagcgctttatcgaaagcgacgcc
agcaaccccttcgaggatgcccagctggcgctggtcgccctggagtggctgacagaagac
gagaaggcgcaggacgcgctgtttgccgccggctgggacctgctggtggtcgacgaggcg
caccacctggtctggcatgaagaccaggtcagccccgagtacgccctggtcgagcaactg
gccgaggtcatccccggcgtcctgctgctgaccgcaactccggagcaactgggccaggac
agccacttcgcccgcctgcgcctgcttgacccgaaccgtttccacgacctggccgccttc
cgcgccgaaagcgaacactatcgcccggtagccgaagcggtacaggaactgctcgacgaa
ggccgcctgtcgccccaggcccacgccaccatcgaaggtttcctcggtgccgaaggcgaa
gccctgctggccgcggtcaacgatggcgacacccaggccagcgcccgcctgatccgcgag
ctgctcgaccgccacggcaccggccgcgtactgtttcgcaacactcgcgccgccgtccag
ggtttccctgagcgcaacctgcacccctacccgctgcccaaccccgaccagtacatggag
ctgccgctgggcgaacacgccgagctgtacccggaagtggccttccagtcccagggcgaa
ggcagcgaagaagagcgctggtggcgcttcgacccccgggtcgactggctgatcgacacc
ctgaagatgctcaagcgggtcaaggtcctggtgatctgcgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtgcgttccggtattcccgcgacggtgttccatgaaggc
atgagcattcttgagcgtgaccgcgccgccgcctacttcgccgacgaagaattcggcgcc
caggtgctgatctgctcggagatcggcagtgaaggccgcaacttccagttcgcccatcac
ctggtgctgttcgacctgcccgcccacccggacctgctcgagcagcgtatcggccgtctg
gaccggatcggccagaagcacactatcgaactgcacgtgccgcacctgcagaacagcccg
caagagcggctgttccagtggtaccaccaggccctgaacgccttcctcaacacctgccca
accggcaacgccctgcagcatcagttcggcccgcgcctgctgccgctgctcgaaagcggt
gacgatgacgaatggcaagcgctggtggacgaagcccgcgccgagcgcgagcgcctcgaa
gccgagctgcacagcggccgcgaccgtctgctcgaactcaactccggtggcgccggtgaa
ggccaggagctggtcgaggcgatcctcgaacaggacgaccagttcgccctgccgatctac
atggaaaccctgttcgacgccttcggcatcgacagcgaagaccactcggaaaacgccctg
atcctcaagccgagcgaaaaaatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacttacgaccgcaaccaggcgctgtcacgcgaagacatgcagttcatcacc
tgggagcatccgatggtccagggcggcatggacctggtactgtccggctcgatgggcaac
acctcggtggcgctgatcaagaacaaggcgctcaagcccggcaccgtgctgctggaactg
ctgtacgtgagtgaagtggtggccccgcgcgccctgcaactgggccgttacctgccaccg
gccgccctgcgctgcctgctcgacaccaatggcaacgacctggcttcgcgggtgtccttc
gaaaccctcaacgaccagctcgaaagcgtgcccaaggccagcgccaacaagttcatccag
gcccagcgcgacgtactggcgccgcggatcaacagcggcgaagccaagatcatgccgcgc
catgccgagcgtgttgcccaagcgcagcagcgcctggcggcggaaaccgacgaagagctg
gcgcgcctgactgcgctgcaagcggtcaacccgaccgtacgcgacagcgaaatcgaagcc
ctgcgcaagcagcgtgaacaaggcctggcaatgctggagaaagcggcgctgcgcctggaa
gcgattcgggtgttggtcgccggataa
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