Pseudomonas donghuensis: BV82_4476
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Entry
BV82_4476 CDS
T07361
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pdw
Pseudomonas donghuensis
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdw03019
]
BV82_4476 (rnc)
03009 Ribosome biogenesis [BR:
pdw03009
]
BV82_4476 (rnc)
03036 Chromosome and associated proteins [BR:
pdw03036
]
BV82_4476 (rnc)
Enzymes [BR:
pdw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BV82_4476 (rnc)
Messenger RNA biogenesis [BR:
pdw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BV82_4476 (rnc)
Ribosome biogenesis [BR:
pdw03009
]
Eukaryotic type
90S particles
RNase
BV82_4476 (rnc)
Prokaryotic type
rRNA processing factors
BV82_4476 (rnc)
Chromosome and associated proteins [BR:
pdw03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BV82_4476 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
KDN97617
LinkDB
All DBs
Position
complement(4588150..4588839)
Genome browser
AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKNQELMLLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDSDMQTARERVLAWLAGEFESLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRTFFVECEVTLLTEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtttccttgagccgcctcgagcgccagctcggttataccttcaagaaccaggag
ctgatgctgctggccctgacgcaccgcagttttgccgggcgtaacaacgaacgcctcgag
tttctcggcgatgcgatcctcaacttcgtcgccggtgaagcgctgttcgagcgtttcccc
caggcccgcgaaggccagctgtcgcgcttgcgggcgcgtctggtcaagggcgagaccctg
gcggtactggcccgtggctttgacctgggcgaatacctgcgcctgggctcgggcgagctg
aaaagcggcggtttccgccgcgagtcgattcttgccgatgccctggaggcgctgattggc
gccatctacctggactcggacatgcaaaccgcccgcgagcgggtgctggcatggctggca
ggcgaattcgaaagcctgaccctggtcgataccaacaaggacccgaaaacccgtctgcag
gaattcttgcagtcgcgggcctgcgaactgccgcgctacgaagtggtggatattcaaggt
gaaccccattgccggacgtttttcgtcgaatgcgaagtgacccttttgactgaaaaaagc
cgagggcaaggcgtcagccggcgtatcgccgagcaagtcgcggccgccgcagcactgatc
gccctgggcgtggagaatggcaatgactga
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