Pseudomonas donghuensis: BV82_4738
Help
Entry
BV82_4738 CDS
T07361
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BV82_4738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdw03021
]
BV82_4738
Transcription machinery [BR:
pdw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BV82_4738
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_IclR
HTH_24
GerE
HTH_7
HTH_28
TnsD
HTH_10
HTH_29
HTH_11
HTH_40
HTH_SB
Motif
Other DBs
NCBI-ProteinID:
KDN97380
UniProt:
A0AAP0XBC3
LinkDB
All DBs
Position
4874425..4874919
Genome browser
AA seq
164 aa
AA seq
DB search
MPSAPSSSLEGLYLDHHNWLTGWLRRRLGCPDSAADLAQDTFMRLLQARETPLLNEPRAF
LTTVAKRVLCNHYRRQDLERAYLQALAQLPEALAPSEEHRAIIFETLLELDRLLDGLPLA
VKRAFLMAQVDGLGYSEIAAQLGISLATVKRYLSKAAMRCYFAL
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagcgctccctcttcctcgctcgaaggcctctacctcgaccatcacaactggctg
accggctggttgcgccggcgtctgggctgccccgacagcgctgcggacctggcccaggac
accttcatgcgcctgctccaggcccgcgaaacgccactgctcaacgagccgcgggcgttc
ctcaccaccgtggccaagcgcgtgctgtgcaatcactaccgccgtcaggacctggagcgc
gcctacctccaggcgctggcgcagttgcccgaagcactggcgccgtcggaagaacaccgg
gcaatcattttcgagaccctgctggagctcgaccgcctgctcgacggcctgccattggcg
gtcaagcgcgccttcctgatggcccaggtcgatggcttgggctacagcgagatcgctgcg
caactgggcatctccctagccacggtcaagcgctacctgagcaaggcggccatgcgctgt
tacttcgccctgtga
DBGET
integrated database retrieval system
