Pseudomonas donghuensis: BV82_4844
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Entry
BV82_4844 CDS
T07361
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BV82_4844 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdw03019
]
BV82_4844 (pnp)
03016 Transfer RNA biogenesis [BR:
pdw03016
]
BV82_4844 (pnp)
Enzymes [BR:
pdw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BV82_4844 (pnp)
Messenger RNA biogenesis [BR:
pdw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BV82_4844 (pnp)
Transfer RNA biogenesis [BR:
pdw03016
]
Prokaryotic type
tRNA degradation factors
BV82_4844 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
KDN97295
UniProt:
A0AAP0SEP3
LinkDB
All DBs
Position
complement(4984636..4986741)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDNDVTVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFEGPIGAARVAFHESTGYLLNPTYEQLAASSLDMVV
AGTSDAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIQAVKELAAEAAKPTWDWKPAAAN
TELLNAIRGEFGAAVSDAYTITVKADRYARLGELREQVIAKFSGEEGQPSASEVKEIFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRSELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKDAAEAARQRVLSITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaaattccagttcggtcaatcgaccgttaccctcgagacgggc
cgtattgctcgtcaagcgtccggcgccgtattggtcaccgtcgacaacgatgtcaccgta
ctggtgaccgtggtcggtgccaaacaggccgatccaggcaaaggcttcttccccctgtcc
gttcactatcaggaaaagacctacgccgccggcaagatccctggtggtttcttcaagcgt
gaaggccgtccttccgagaaagaaaccctgacctcgcgtctgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatc
tccggcattccgttcgaaggcccgatcggcgctgctcgtgttgctttccacgaaagcacc
ggctacctgctgaacccgacctacgagcaactggctgcctcgagcctggacatggtcgtt
gccggtacctccgacgccgtgctgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgccgtactgtttgcccacgatgaattccaggctgtgatccaggctgtc
aaagagctggccgccgaagctgccaagccgacctgggactggaagccagccgctgccaac
accgaactgctgaacgccatccgtggtgaattcggtgctgcggtttccgacgcctacacc
atcaccgtcaaggctgaccgttacgctcgcctgggcgaactgcgcgagcaagtgatcgcc
aagttctccggtgaagaaggtcaaccttcggcttccgaagtcaaagagatcttcggcgaa
atcgaataccgcaccgttcgcgaaaacatcgttaacggcaagccacgtatcgatggccgt
gacaccaagaccgtacgtccgctgaacatcgaagtcggtgtactgccaaagacccacggt
tcggcgctgttcacccgcggcgaaacccaggccctggtcgttgcgaccctgggtactgcc
cgtgacgcgcaactgctggacaccctcgaaggcgagaagaaagaccccttcatgctgcac
tacaacttcccgccgttctcggtgggcgagtgtggtcgcatgggcggtgctggccgtcgc
gaaatcggtcacggccgtctggcccgtcgttcggtccaggccatgctgcctgccgccgac
gtgttcccgtacaccattcgcgtcgtatcggaaatcaccgaatccaacggttcgagctcc
atggcttcggtctgtggtgcttccctggccctgatggacgctggtgtaccgatgaaggca
ccggttgccggtatcgccatgggtctggttaaagaaggcgagaaattcgccgtcctgacc
gacatcctcggtgacgaagaccacctgggcgacatggacttcaaggtagccggtaccgcc
aaaggtgttaccgcgctgcagatggacatcaagatcaacggcatcaccgaagagatcatg
gaaatcgccctgggccaggccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcattggtcagtcccgtagcgaactgtcggaaaacgctccgaccatgatcgccatgaag
atcgacaccgacaagatccgtgacgtcatcggtaaaggcggcgcgaccatccgtgccatc
tgcgaagaaaccaaggcttcgatcgatatcgaagacgacggctcgatcaagatcttcggc
gagaccaaagacgctgctgaagctgctcgtcagcgtgttctgagcatcactgccgaggcc
gagatcggcaagatctacgtcggtaaggtcgagcgcatcgttgacttcggtgccttcgtc
aacatcctgcctggcaaggacggtctggttcacatctccatgctgagcgatgctcgtgtt
gagaaagtgaccgacatcctcaaagaaggtcaggaagttgaagtactggtactggacgtg
gacaaccgcggccgtatcaagctgtcgatcaaggacgttgccgctgccaaggcatccggc
gtctaa
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