Pseudomonas donghuensis: BV82_4847
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Entry
BV82_4847 CDS
T07361
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pdw
Pseudomonas donghuensis
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdw03016
]
BV82_4847 (truB)
Enzymes [BR:
pdw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BV82_4847 (truB)
Transfer RNA biogenesis [BR:
pdw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BV82_4847 (truB)
Prokaryotic type
BV82_4847 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
LRR_FBXL18
Motif
Other DBs
NCBI-ProteinID:
KDN97298
UniProt:
A0AAP0SFS9
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All DBs
Position
complement(4987415..4988332)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLASGVLPLCFG
EATKFSQYLLDSDKGYETVMQLGQTTTTGDAEGEVLKTRDVTVGRADIEAVLPQFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTINRLELLQCEGTRVRLSVGCSKGTYI
RTLVEDIGEVLGCGAYVAELRRTHAGPFELAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatccgtcgtaacgtcagcggcatcatcctgctcgacaagccg
ttggggttcacctccaacgccgccctgcagaaggtccgctggctactcaacgccgaaaag
gccgggcacaccggtagcctcgatccactggccagcggcgtgctgccgctgtgctttggt
gaggcgaccaagttctcgcagtacctgctcgattccgacaagggctacgagacggtcatg
caactgggtcagaccaccaccacgggcgatgccgaaggtgaagtgctgaaaacccgtgac
gtgaccgttggtcgcgccgatatcgaagcggttttgccacaatttcgtggtcaaatcagt
cagataccgccgatgtactcggccctcaagcgcgacggtcagccactgtacaagctcgcc
cgtgcaggtgaagtagtggagcgcgaggcgcgttctgttactattaaccgcttggaattg
ctccagtgcgaaggcacccgtgttcggctgtcagtcggctgcagcaaaggcacctacatc
cgcactctggtcgaggatatcggcgaggtgctcggttgcggagcctatgtcgctgaactg
cgccgtacgcacgcgggtcctttcgagctggcccagaccgtgaccctcgaagaactcgaa
gcggtccacgccgaaggtggcaacgaagcagtcgatcgcttcctgatgccatcggacagc
ggtctgctggactggccactgttgcagttctccgagcacagtgcgttctactggctcaat
ggtcagccggtcagagcccccgacgcgccgaagttcggcatggtccgggtacaggatcac
aacggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgcctcgtcgc
ttgattcggtcagaatga
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