Pseudomonas donghuensis: BV82_4884
Help
Entry
BV82_4884 CDS
T07361
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BV82_4884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdw03021
]
BV82_4884
Transcription machinery [BR:
pdw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BV82_4884
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_24
HTH_20
KORA
HTH_30
HTH_40
HTH_38
HTH_28
HTH_7
FrsA-like
HTH_31
GerE
HTH_10
Motif
Other DBs
NCBI-ProteinID:
KDN97333
UniProt:
A0AAP0X8Q2
LinkDB
All DBs
Position
5028364..5028864
Genome browser
AA seq
166 aa
AA seq
DB search
MPAPDHAALHALYSEHNGWLKNWLRARLGNASDAADLAQDTFIRVLNARNADTIREPRSY
LGAIAHALMIDKFRRKALEQAYLDALALRPERVAESPESRLLILETLLAVDQMLDGLGER
TRTIFLTVQLEGLSYVATAERLGVSVTTVKKHLIRAMTHCLLLTDD
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctcccgatcatgctgccctgcacgcgctctacagcgaacataatggttggttg
aagaactggctgcgtgctcgcctgggcaatgccagcgatgccgccgaccttgcccaggac
acctttatccgggttttgaacgcgcgcaatgccgacactattcgcgagccgcgcagctac
ctgggtgccattgcccatgcgttgatgatcgacaagtttcgccgcaaggcgcttgaacag
gcgtacctggacgcactggcgctgcgcccggagcgggtcgccgaatcgccggaaagccgc
ttgctgatcctcgaaaccttgctggccgtggaccagatgctcgatggtctgggcgagcgt
acgcgcactatcttcctcaccgtacagctcgaaggcctgagctatgtggccactgccgag
cgcctgggggtgtcggtgaccacggtgaagaagcacctgatccgcgccatgacccactgc
ctgctgctgacggacgactga
DBGET
integrated database retrieval system
