KEGG   Pseudomonas donghuensis: BV82_4896
Entry
BV82_4896         CDS       T07361                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pdw  Pseudomonas donghuensis
Pathway
pdw03030  DNA replication
pdw03430  Mismatch repair
pdw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pdw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BV82_4896
   03430 Mismatch repair
    BV82_4896
   03440 Homologous recombination
    BV82_4896
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdw03032]
    BV82_4896
   03400 DNA repair and recombination proteins [BR:pdw03400]
    BV82_4896
Enzymes [BR:pdw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BV82_4896
DNA replication proteins [BR:pdw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BV82_4896
DNA repair and recombination proteins [BR:pdw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BV82_4896
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: KDN97345
UniProt: A0AAP0SFW4
LinkDB
Position
complement(5041024..5041626)
AA seq 200 aa
MERIAVIDFETTGISPGAGCRATEVAVVMLERGRIVERYQSLMNAGVPVPAFVAGLTGIT
TAMLRSAPPIARVMNEVAEFVGDTPMLAHNASFDQKFWDYELSQIGRSRSQRFACSMLLA
RRLMPSAPNHKLGTLTRWAGLPDTGTAHRAMADAEMAANLAQHLAGQLRQQGVNGVSHQL
FCSLQKVPAAKIGEALKVYR
NT seq 603 nt   +upstreamnt  +downstreamnt
ttggaacgtatcgctgtcatcgactttgaaaccaccggcatttcacccggtgccggttgc
cgggccacggaggtggcggtggtcatgctggagcgcgggcgcatcgtcgagcgctatcaa
agcctgatgaatgccggggtgccggtaccggcgtttgtcgccggcttgaccggcatcacc
accgccatgctgcgcagtgcgccgccgattgcccgggtgatgaacgaggtggccgagttc
gtcggcgatacgccgatgctcgcccacaacgcctcgttcgaccagaagttctgggactac
gagctgtcgcagatcggccgtagccgcagccagcggttcgcctgctcgatgttgctggcg
cgacgcctgatgccctcggcgcctaaccacaaattgggcaccctgacccgttgggccggc
ctgcctgataccggtaccgcgcaccgggccatggccgatgctgaaatggccgccaacctg
gcccagcacctggccgggcaattgcgccagcagggcgtcaacggtgtctcccaccagttg
ttctgcagcctgcagaaagtccccgcggcgaagatcggcgaagcgctgaaagtctatcgc
tag

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