Pseudomonas donghuensis: BV82_4935
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Entry
BV82_4935 CDS
T07361
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw00550
Peptidoglycan biosynthesis
pdw01100
Metabolic pathways
pdw01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BV82_4935 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BV82_4935 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdw01011
]
BV82_4935 (mrdA)
Enzymes [BR:
pdw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BV82_4935 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pdw01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
BV82_4935 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
TPR_7
Motif
Other DBs
NCBI-ProteinID:
KDN97175
UniProt:
A0AAP0SEU6
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All DBs
Position
complement(5081338..5083227)
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AA seq
629 aa
AA seq
DB search
MSQPIRLKDHEKDARLVRSRVVVGAVAIVLLICVLIARLYYLQVIQYDYHSTLSENNRVH
VQPIPPTRGLIFDRNGVIVADNRPSFSLSMTRERSGDWQQVLDVIVEVLELTPDDRTLFE
KRMRQGRRPFEPVPILFELTEEQIARIAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYV
GRINEKELKTLDPVNYSGTHHIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTD
PIPGKDIVLSLDIKLQEAAEAALGGRRGAIVALDPNTGEVLAMVSQPSFDPNLFVTGISF
KAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVTASSRVFDPGYYQLPNY
DHKYRNWNRSGDGWVDLDTAIMRSNDTYFYDLAHKMGIDKLSSYMNRFGIGQKVSLDMFE
ESPGLMPSREWKRATRKQAWFPGETLILGIGQGYMQTTPLQLAQATALIASKGKWNRPHL
AKTIEGLPPVDENPMDDIVLRDKSDWNKVTHGMEQVMHGARGTARKASVGAQYRIAGKSG
TAQVVAIKQGEKYDRNKLQERHRDHALFVGFAPADNPKIVVSVMVENGESGSGVAAPVVR
QVMDAWLLGPDGRLKPEFTNPTVAQEPAP
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagccgattcgcctcaaggatcacgagaaagacgcccgcctggtgcgtagccgc
gtcgtggtcggtgcagtggcgatcgtcctgctgatctgcgtgttgattgcccgcctgtat
tacctgcaggtgatccagtacgactatcactcgaccctgtcggaaaacaaccgggtgcat
gtgcagccgattccgccgactcgcgggctgattttcgaccgtaacggggtgatcgtcgcc
gacaaccggccaagtttcagcctgagcatgacccgcgagcgctccggcgactggcagcag
gtgctcgacgtgatcgtcgaggtgctggaactgaccccggatgaccgcaccctgttcgaa
aagcgcatgcgccaggggcgtaggccgttcgagccggtgccgatcctgttcgagctgacc
gaggagcagatcgcccgtatcgcggtgaaccagttccggctgccgggtgtggaagtggtt
gcccagttggtgcgccattacccgcagggtgcgcatttcgcgcattcggtcggctatgtc
gggcggatcaacgagaaagagctgaaaaccctcgacccggtgaactacagcggcacccac
catatcggcaagaccggcatcgagcgcttctacgagccggaactgcacggccaggtgggg
tacgaagaggtcgagaccaacgcccggggccgcgtgttgcgggtgctcaagcgtacggac
ccgatccccggcaaggacatcgtcctgagcctcgacatcaagctgcaagaggccgccgag
gctgctttgggcgggcgtcgcggcgctattgtcgccctcgatccgaacaccggcgaagtg
ctggcgatggtcagccagccgagcttcgaccccaacctgttcgtcaccggcatcagcttc
aaggcctacgccgagctgcgcgactcgatcgaccggccgctgttcaaccgcgtgttgcgc
ggcttgtatccgccaggctcgacgatcaagccggcggtggcgattgccggcctggacagt
ggcgtggtcaccgcatcgagtcgggtgttcgatccgggctattatcaactgcccaattac
gaccacaagtaccgcaactggaaccgcagcggtgatggctgggtggacctggacacggcg
atcatgcgttccaacgacacctacttctacgacctggcgcacaagatgggcatcgacaaa
ctgtcgtcctacatgaaccgcttcggcatcggccagaaggtctcgctggacatgttcgaa
gagtcgccggggctgatgccgtcgcgggaatggaagcgtgccacccgcaagcaggcctgg
ttcccgggggaaaccctgattctcgggatcggccagggctacatgcagaccacgccgttg
caactggcccaggccaccgcgctgatcgccagcaagggcaagtggaaccgcccgcacctg
gccaagaccatcgagggcctgccgccggtggacgaaaaccccatggacgacatcgtcctg
cgcgacaagtcggactggaacaaggtcacccacggcatggagcaggtgatgcacggtgcc
cggggtaccgcgcgcaaggcctcggtcggcgctcagtaccggattgccggcaagagtggt
accgctcaggtggtagcgatcaagcagggtgagaagtacgaccgcaacaagctgcaagag
cgccaccgcgaccacgccctgttcgttggcttcgcgccggccgacaacccgaagatcgtg
gtctcggtgatggtcgagaacggcgagtccggctccggcgtcgccgcgccggtggtgcgc
caggtgatggacgcctggctgcttggcccggacggccgcctcaagcctgaattcaccaac
cccaccgttgcccaggagcctgccccgtga
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