Pseudomonas donghuensis: BV82_5035
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Entry
BV82_5035 CDS
T07361
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw00300
Lysine biosynthesis
pdw00470
D-Amino acid metabolism
pdw01100
Metabolic pathways
pdw01110
Biosynthesis of secondary metabolites
pdw01120
Microbial metabolism in diverse environments
pdw01230
Biosynthesis of amino acids
Module
pdw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BV82_5035
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BV82_5035
Enzymes [BR:
pdw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BV82_5035
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
PP-binding
Ala_racemase_N
TM1266-like
Motif
Other DBs
NCBI-ProteinID:
KDN97035
LinkDB
All DBs
Position
complement(3260485..3262083)
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AA seq
532 aa
AA seq
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MKLSKELVLQAKATFGTPTYLYDEAVLRSSFNELRDALPDCVDIFYALKVNPNLSLVKLI
RSYGGNTEVCSLGELEIALKAGVAPEDIIFLGPYKKPEEHRRALEVGVFAIVVESETELR
KLSALAGELGRVAPVAIRINPNFSASGSPWKMGGRPTHFGIEEDTAVANFGDYAALPNLQ
IKGIHVYNGTKILDAQSVYDNAKYILGLYRSLTRRYNLDMSMVDVGGGLGIKYYENESEL
DTRQLKQLLAPLFEAFNQQFPQTRIIVESGRFVAGKCGALLVTVDNIKENHGKTFAVTDG
GTNCHGAAAGSGQVLKRNFRIVHATGSTGAPLREYHISGPLCSPDDLLARDLQIETLHEG
DILAVTASGAYGPSASPTLFHSHGHPAEVIVSNGQLFLARARQTALDIRDSHADVPLSAM
LGAAPAASEPTPIAQAATQRQLGEILRVVLKLPANTVISADSHLRDDLGLDSLTSMELLV
NLEDDIEGFFVNPDTIAPGHFNTVATLAGYIDAHRQPAAVRRARFEVQHEGV
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttccaaggaactggtcctccaggcaaaagcgacgttcgggacaccgacctac
ctctacgatgaagccgtgctacgcagcagtttcaacgagttgcgcgatgcattgccggac
tgcgtggatatcttctatgcgttgaaggtcaacccgaacctgtccctggtgaaactgatc
cgctcctacggcggcaataccgaagtctgctcgctgggcgagctggaaatcgccctgaag
gccggggtcgctcctgaggacatcattttcctcgggccctacaagaaacccgaggaacat
cggcgcgccctggaagttggggtgtttgccatcgtcgtcgaatcggaaaccgaactgcgc
aaactctcggcgctggcgggcgaactcggccgcgtggcgccggtggcgattcgtatcaac
cctaacttctccgcctccggttccccgtggaagatgggcgggcggccgacccatttcggc
attgaagaagatacggccgttgccaatttcggcgactacgcggcgttgccaaacctgcag
atcaaaggcatccacgtttacaacgggaccaagatcctcgatgcgcagtcggtgtacgac
aacgccaagtacattcttggcctctaccgtagcctgacccggcgctacaacctggacatg
agcatggtcgatgtcggcggcggcctgggtatcaagtactacgagaacgagagcgaactc
gacacccgccagctcaagcaactgctggcgccactgttcgaggcgttcaatcagcagttc
ccgcagacccggatcattgtcgagtcggggcgcttcgtcgccggcaagtgcggtgccctg
ctggtgacggtcgacaacatcaaggaaaaccacggcaagacctttgccgtcaccgatggc
ggtaccaattgtcatggcgccgccgctggcagcggccaggtgctcaaacgcaacttccgt
attgtccacgccaccggcagcaccggcgcgccgctgcgcgaataccatatctccgggccg
ctctgtagccccgatgatctgctggcccgtgacctgcagatcgaaaccctgcacgagggc
gacatcctcgccgtcaccgcctcaggtgcctacggcccgtctgcttcgccgaccctgttc
cacagccatggccacccggccgaagtgattgtcagcaacggccagctgttcctcgcccgt
gcccggcaaaccgccctggacatccgtgacagccacgccgatgtaccgctgtcggccatg
ctcggcgctgccccggcggcgagcgagccgacgccgatcgcccaggcggcgacccagcgt
cagctcggcgagatcctgcgggtggtgctgaaactgccggcaaacaccgtgatcagcgcc
gactcgcatctgcgggacgacctggggctggattcactgacctccatggagttgctggtc
aatctggaagacgatatcgaaggtttcttcgtcaaccccgacaccatcgcccccggacac
ttcaataccgtcgccaccctggccggctatattgacgcccaccgtcaaccggcggcggtg
cgccgggcacgtttcgaggtgcagcatgaaggcgtctga
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