KEGG   Pseudomonas donghuensis: BV82_5035
Entry
BV82_5035         CDS       T07361                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pdw  Pseudomonas donghuensis
Pathway
pdw00300  Lysine biosynthesis
pdw00470  D-Amino acid metabolism
pdw01100  Metabolic pathways
pdw01110  Biosynthesis of secondary metabolites
pdw01120  Microbial metabolism in diverse environments
pdw01230  Biosynthesis of amino acids
Module
pdw_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pdw00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BV82_5035
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BV82_5035
Enzymes [BR:pdw01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     BV82_5035
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC PP-binding Ala_racemase_N TM1266-like
Other DBs
NCBI-ProteinID: KDN97035
LinkDB
Position
complement(3260485..3262083)
AA seq 532 aa
MKLSKELVLQAKATFGTPTYLYDEAVLRSSFNELRDALPDCVDIFYALKVNPNLSLVKLI
RSYGGNTEVCSLGELEIALKAGVAPEDIIFLGPYKKPEEHRRALEVGVFAIVVESETELR
KLSALAGELGRVAPVAIRINPNFSASGSPWKMGGRPTHFGIEEDTAVANFGDYAALPNLQ
IKGIHVYNGTKILDAQSVYDNAKYILGLYRSLTRRYNLDMSMVDVGGGLGIKYYENESEL
DTRQLKQLLAPLFEAFNQQFPQTRIIVESGRFVAGKCGALLVTVDNIKENHGKTFAVTDG
GTNCHGAAAGSGQVLKRNFRIVHATGSTGAPLREYHISGPLCSPDDLLARDLQIETLHEG
DILAVTASGAYGPSASPTLFHSHGHPAEVIVSNGQLFLARARQTALDIRDSHADVPLSAM
LGAAPAASEPTPIAQAATQRQLGEILRVVLKLPANTVISADSHLRDDLGLDSLTSMELLV
NLEDDIEGFFVNPDTIAPGHFNTVATLAGYIDAHRQPAAVRRARFEVQHEGV
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgaagctttccaaggaactggtcctccaggcaaaagcgacgttcgggacaccgacctac
ctctacgatgaagccgtgctacgcagcagtttcaacgagttgcgcgatgcattgccggac
tgcgtggatatcttctatgcgttgaaggtcaacccgaacctgtccctggtgaaactgatc
cgctcctacggcggcaataccgaagtctgctcgctgggcgagctggaaatcgccctgaag
gccggggtcgctcctgaggacatcattttcctcgggccctacaagaaacccgaggaacat
cggcgcgccctggaagttggggtgtttgccatcgtcgtcgaatcggaaaccgaactgcgc
aaactctcggcgctggcgggcgaactcggccgcgtggcgccggtggcgattcgtatcaac
cctaacttctccgcctccggttccccgtggaagatgggcgggcggccgacccatttcggc
attgaagaagatacggccgttgccaatttcggcgactacgcggcgttgccaaacctgcag
atcaaaggcatccacgtttacaacgggaccaagatcctcgatgcgcagtcggtgtacgac
aacgccaagtacattcttggcctctaccgtagcctgacccggcgctacaacctggacatg
agcatggtcgatgtcggcggcggcctgggtatcaagtactacgagaacgagagcgaactc
gacacccgccagctcaagcaactgctggcgccactgttcgaggcgttcaatcagcagttc
ccgcagacccggatcattgtcgagtcggggcgcttcgtcgccggcaagtgcggtgccctg
ctggtgacggtcgacaacatcaaggaaaaccacggcaagacctttgccgtcaccgatggc
ggtaccaattgtcatggcgccgccgctggcagcggccaggtgctcaaacgcaacttccgt
attgtccacgccaccggcagcaccggcgcgccgctgcgcgaataccatatctccgggccg
ctctgtagccccgatgatctgctggcccgtgacctgcagatcgaaaccctgcacgagggc
gacatcctcgccgtcaccgcctcaggtgcctacggcccgtctgcttcgccgaccctgttc
cacagccatggccacccggccgaagtgattgtcagcaacggccagctgttcctcgcccgt
gcccggcaaaccgccctggacatccgtgacagccacgccgatgtaccgctgtcggccatg
ctcggcgctgccccggcggcgagcgagccgacgccgatcgcccaggcggcgacccagcgt
cagctcggcgagatcctgcgggtggtgctgaaactgccggcaaacaccgtgatcagcgcc
gactcgcatctgcgggacgacctggggctggattcactgacctccatggagttgctggtc
aatctggaagacgatatcgaaggtttcttcgtcaaccccgacaccatcgcccccggacac
ttcaataccgtcgccaccctggccggctatattgacgcccaccgtcaaccggcggcggtg
cgccgggcacgtttcgaggtgcagcatgaaggcgtctga

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