Pseudomonas donghuensis: BV82_5113
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Entry
BV82_5113 CDS
T07361
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BV82_5113
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdw02000
]
BV82_5113
Transporters [BR:
pdw02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BV82_5113
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
KDN97113
UniProt:
A0AAP0XBG8
LinkDB
All DBs
Position
complement(3172112..3173149)
Genome browser
AA seq
345 aa
AA seq
DB search
MKSNLLKRSPWLFALAVGAVQAAPDMVVVAYGGAGQKAQDAAIFKPFSAQDGSTLIQSEY
NGEMARIKVMVDTGNVDWDLVQIEGPDLMRGCDEGMYERLDWTRLGRAEQLIPDAAQECG
SAVLVWSVAIAYDRNKLAQAPTSWADFWDVKKIPGKRGLRKRAVYNLEFALMADGVKVED
VYKVLATPEGVDRAFNKLSELKPYIQWWEAGAQPAQWLSAGDVVMTSTYSGRVAVAAQQG
SPLALVWPGSLYGMDYWAIIKGSRHVDQAKRLIAFANQPDTQVRYVKEIPYGPTNIQAAA
ELDPQLASWVPTSRQNLEGALSMNVEFWVDHGDELEERFNAWASR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgaacctgctcaagcgctctccctggctgttcgcccttgctgtcggcgccgtc
caggcagcaccggacatggtcgtggtcgcctacggcggcgccggccagaaagcccaggat
gcggcgatcttcaagccgttcagtgcccaggacggcagcacgttgatccagagcgagtac
aacggcgaaatggcccggatcaaggtcatggtcgataccggcaacgtcgactgggacctg
gtgcagatcgaaggcccggacctgatgcgcggctgcgacgagggcatgtacgagcgcctc
gactggacccggctcgggcgtgccgagcagttgatccccgatgccgctcaggaatgcggc
tcggcggtgctggtgtggagcgtggcgatcgcctacgaccgcaacaagctggcccaggca
ccgacctcgtgggcggatttctgggacgtgaaaaaaatccccggcaaacgcggcctgcgc
aagcgggcggtgtacaacctggagttcgcgctgatggccgacggggtcaaggtcgaggac
gtgtacaaggtcctggccacccccgagggcgtcgaccgcgccttcaacaagctcagcgag
ctcaagccctatatccagtggtgggaagccggcgcgcaaccggcgcagtggctgagcgcc
ggcgatgtggtgatgacctcgacctacagcggccgggtcgccgtcgccgctcaacagggc
agcccgttggccctggtgtggccgggcagcctatacggcatggattactgggcgatcatc
aagggctccaggcatgtcgaccaggccaagcgcctgatcgccttcgccaaccagcccgac
acccaggtgcgctatgtgaaggagattccttacgggccgaccaacatccaggccgccgcc
gagcttgatccgcagctggccagctgggtgccgacctccaggcagaaccttgaaggcgcg
ctgtcgatgaacgtcgagttctgggtcgatcatggcgatgaactggaagagcgcttcaac
gcctgggccagccgctga
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