Pseudonocardia dioxanivorans: Psed_0001
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Entry
Psed_0001 CDS
T01479
Name
(GenBank) Chromosomal replication initiator protein dnaA
KO
K02313
chromosomal replication initiator protein
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Psed_0001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdx03032
]
Psed_0001
03036 Chromosome and associated proteins [BR:
pdx03036
]
Psed_0001
DNA replication proteins [BR:
pdx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Psed_0001
Chromosome and associated proteins [BR:
pdx03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Psed_0001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DnaA
Bac_DnaA_C
IstB_IS21
AAA
AAA_22
Hda_lid
AAA_16
ATPase_2
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AEA22286
UniProt:
F4D245
LinkDB
All DBs
Position
121..1788
Genome browser
AA seq
555 aa
AA seq
DB search
MTDQPGDLGAVWNRVIGDLSGSSGDGDTPPLSAQQRAFLRLTRPLGLLDGTALLAAPSEF
AKDAIERILRKPISDALGRHLGVQVNLAVVVDASAASGGTEVPDPPDPRAAARVAPAERS
AGPSGLAASVDVVGDAEPLSANGSHSDLGSLGEAAPIDDSAGRFRSGPAAAQADLLPPPA
SGIPGPDSRPGQDGWPTYSAPAPDAPPAARSRSMLNEKYTFDTFVIGASNRFSHAAAVAV
AEAPARAYNPLFIWGESGLGKTHLLHAVGHYAQRLFPGMRVRYVSTEEFTNDFINSLRDD
RKVAFQRRYRDVDVLLVDDVQFLEGKEGTQEEFFHTFNTLHNSNKQIVVSSDRPPKRLET
LEDRMRTRFEWGLITDIQPPELETRIAILRKKAAQDRLAVPGDVLEFIAARIERNIRELE
GALIRVTAFASLNRQPVDTQLAEIVLRDLIPDSAASEITAPTIMAVTAEFFDVTMDELCG
PGKTKALAQARQIAMYLCRELTDLSLPRIGQTFGGRDHTTVMHADKKIRNEISLRRKTFE
QVQELTARIKQRARH
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaccaaccaggggatctgggagcggtctggaaccgggtcatcggcgatctctcg
gggtcctccggcgacggggacacgccgccgctctccgctcagcagcgggcgttcctccgg
ctgacgcgaccgctcgggctcctcgacggcaccgcgctgctcgccgcgccgagcgagttc
gcgaaggacgcgatcgagcgaatcctccgcaagccgatcagcgacgccctcggtcgccat
ctcggcgtccaggtcaacctcgccgtcgtcgtcgacgcgtccgccgcgtccgggggcacc
gaggttcccgacccgcccgatccccgcgccgctgcgcgggtcgctcccgccgagcggtcc
gccggcccgtcgggcctcgccgcgtcggtcgacgtggtcggcgatgcggagccgctgtcc
gccaacggctcacactcggatctcggatcgctgggcgaggccgcgccgatcgacgacagt
gccggccggttccggtccggacccgctgccgcccaggcggatctccttccgccgccggcc
tccgggattccggggcccgactcgcgccccggccaggacggctggcccacctattccgcg
ccggcgccggatgccccgcctgccgcgcgctcgcgctcgatgctcaacgagaagtacacc
ttcgacaccttcgtcatcggggcgtcgaacaggttcagccacgccgcggcggtcgccgtg
gcggaggcacccgcccgcgcctacaaccccttgttcatctggggcgagtccggactgggc
aagacgcacctgctgcatgccgtcgggcactacgcacagcggctcttcccgggcatgcgg
gtgcgctacgtcagcaccgaggagttcaccaacgacttcatcaacagcctgcgcgacgac
cggaaggtggcgttccaacgtcgctaccgcgacgtcgacgtgctgctggtggacgacgtg
cagttcttggagggcaaggaaggcacccaggaggagttcttccacaccttcaacaccctc
cacaactccaacaagcagatcgtcgtctcctccgaccggccgccgaagcgcctcgagacc
ctcgaggaccgcatgcgcacccggttcgagtggggcctgattaccgacatccagccgccg
gagctggagacgcgcatcgccattctgcgcaagaaggccgcgcaggaccgcctcgccgtc
cccggcgacgtcctcgagttcatcgcggcccgcatcgagcgcaacatccgcgagctcgag
ggcgcgctgatccgggtgacggcgttcgcgtcgctcaaccggcagcccgtcgacacccag
ctcgccgagatcgtgttgcgcgacctcatccccgactccgcggcgtcggagatcaccgcg
ccgacgatcatggccgtcacggccgagttcttcgacgtgacgatggacgagctgtgcggt
cccgggaagaccaaggcgctcgcgcaggcccggcagatcgcgatgtacctgtgtcgcgag
ctgaccgatctgtccttgccgcgcatcggccagaccttcggcggccgcgaccacacgacc
gtcatgcacgcggacaagaagatccgcaacgagatctcgctgcggcgcaagacgttcgaa
caggttcaggagctcaccgcccgtatcaagcagcgcgcccggcactga
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