Pseudonocardia dioxanivorans: Psed_0031
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Entry
Psed_0031 CDS
T01479
Name
(GenBank) type IV secretory pathway VirD4 protein-like protein
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Psed_0031
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TraG-D_C
T4SS-DNA_transf
TrwB_AAD_bind
GAPT
Motif
Other DBs
NCBI-ProteinID:
AEA22313
UniProt:
F4CK90
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Position
29901..31760
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AA seq
619 aa
AA seq
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MNLWTVLLPIAAVAASVWAAKRGAKVLSAGLGLFALLPLTAPVMVVGLPLLLIVGAAGGV
WAWHRWTRSSATVNRWGSRSRRKSGVASSLDVVRFAGSAAMRRRAGGVRPSLAGMDRRDR
WRLPVPEVAVRLCRSGLLWVWSSVEDVTLIFGGPRTGKSGWLAGQILDAPGAALVASTRG
DLYERTASARAGRGPVWVFNAVGLAGLPSTVTFDPISGCADPVTAGERATDMLAATTRAS
TSGDREFWDAQGRRVLAALLHAAALGDKSMRDVLGWLADPGAASREVTVLLRRSPEPAFE
LDLGQFLGTNDRTRSSITSTIMPALGWLTSPAASAAAGLGEEQPWARPLNVDELLATNGT
IYLLGGEEAQVAPLVCALTGHIARQARRTAATRPGGRLDPPLRLALDEAALICPVPLESW
TADMGGRGVNILCAFQSRAQLLARYGTHDAATILNNAGAVMVFGGTRDRDDLQFWSTLTG
ERDEPADTVDPGRHTTAHRRRKTAVLSPAQIANLPAGRVLVIRRGIPPVIGRAQMIWQRP
EVRRAAFADEHPELAERLARCAAWWQTLPGRIGRLGRRRTQVRGVLTASPHEPASERPRL
VVVDALPLETDDGDHRPTG
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtggaccgttcttcttcccatcgccgcggtggccgcctcagtctgggcggcc
aagcggggagcgaaggtactcagcgctggtctcggtctgttcgccctgctgccgctcacg
gcgccggtgatggtggtcgggctgccgctgctgctgatcgtcggcgccgctggcggtgtg
tgggcgtggcatcggtggacgcggtcgtcggcgacggtgaaccggtggggctcccggtcc
cggcgcaagtccggggtcgcctcgagcctggacgtcgtgcgcttcgccggctcggcggcg
atgcgtcgccgagccggtggagtccggccctcgctggccgggatggaccgccgagaccgc
tggcgcctgcccgtgcccgaggtcgccgtgcggttgtgccgcagcgggttgctgtgggtg
tggtcctcggtcgaggacgtcaccctgatcttcggcggcccccgcaccggcaagtccggc
tggctggccgggcagatcctcgacgcccccggcgccgcgctcgtcgcctccacccgcggc
gatctctacgagcgcaccgccagtgcgcgggcgggacgcggcccggtgtgggtgttcaac
gctgtcggcctcgccgggctgccctcgacggtcaccttcgacccgatctccgggtgtgcg
gatccggtgacggcgggggaacgagcgacggacatgctcgccgccaccactcgcgccagc
acctcgggggatcgggagttctgggatgcccaagggcggcgggtacttgccgccctgctc
cacgccgcggccctcggcgacaagtcgatgcgcgacgtcctcggctggctcgccgacccc
ggcgcggcctcgcgggaggtgacggtgctgctgcggcgcagcccggagccggcgttcgag
ctcgacctgggccagttcctgggcacgaacgaccggacccggtcctcgatcacctcgacg
atcatgcccgcgctcggctggctcaccagccccgccgcgagcgccgcagccgggctcggc
gaggagcagccgtgggcccgaccgctgaacgtcgacgagctcctggccactaacggcacc
atctacctgctcggtggggaggaggcgcaggtcgccccgctggtgtgcgcgttgaccggg
cacatcgcccgccaggcccgccgcaccgccgccacccgacccggcggacgcctcgatccg
ccgctgcgactcgcgctcgacgaggcggcgctgatctgcccggtcccgctcgagagctgg
acggcggacatgggtgggcgcggggtcaacatcctgtgcgcgttccagtctcgcgcccaa
ctcctcgcccgctacggcacccacgacgcagccacgatcctcaacaacgccggcgccgtc
atggtcttcggcggtacccgcgaccgcgacgacctgcagttctggtccaccctcaccggt
gaacgcgacgagcccgccgacaccgtggacccggggcggcacaccacggcccaccgaaga
cgcaagacggcggtgctctcgccggcgcagatcgcgaacctgcccgcggggcgggtgctg
gtgatccggcgggggattccgccggtgatcggtcgggcgcagatgatctggcagcgcccc
gaagtccggcgggccgcattcgccgacgagcacccggagctcgccgagcgcctcgcgcgg
tgcgcggcctggtggcagacgttgccgggccggatcggtcggctgggacgtcgccgcacc
caggtccgcggcgtcctcaccgccagtccccacgagccggcgtcggagcgtccccggctg
gtcgtcgtcgacgccctcccgctcgaaaccgacgacggggaccaccggccgaccggctga
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