Pseudonocardia dioxanivorans: Psed_0133
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Entry
Psed_0133 CDS
T01479
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx00061
Fatty acid biosynthesis
pdx00071
Fatty acid degradation
pdx01100
Metabolic pathways
pdx01212
Fatty acid metabolism
pdx02024
Quorum sensing
pdx04146
Peroxisome
Module
pdx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Psed_0133
00071 Fatty acid degradation
Psed_0133
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Psed_0133
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psed_0133
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pdx01004
]
Psed_0133
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdx04147
]
Psed_0133
Enzymes [BR:
pdx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Psed_0133
Lipid biosynthesis proteins [BR:
pdx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Psed_0133
Exosome [BR:
pdx04147
]
Exosomal proteins
Exosomal proteins of breast milk
Psed_0133
Exosomal proteins of breast cancer cells
Psed_0133
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AEA22409
UniProt:
F4CIL2
LinkDB
All DBs
Position
complement(145358..147172)
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AA seq
604 aa
AA seq
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MTATASAAPSVARMFHDRVHASADREAFRVPESDGTWRAITWGETGERVGRLAAGLIALG
VEAGDRVAIMAGTRYEWIVADLAIMCAGAATTTVYPTTGAPDVAFILADSGSRVVFAEDE
TQVAKLRAHRDELPDVGVVVLLDGTPEDDDDWVITVTDLAARGRALTETSPDAVADRIDG
ISPDDLATLIYTSGTTGRPKGVRLPQKAWTYQGDALTKLDLCRPDDLQYLWLPLAHSFGK
VLLAAQLAIGFTTAVDGRVDRIVENMAVVRPTMMAAAPRIFEKAHARIVTTIAAEGGPKA
TLFTWAMSVGRKVSDLKLAGRRVPPLLAAQHRLADALVLSKIRARFGGRVRFFISGSAAL
APDLAHWFHAAGVLILEGYGMTENAAGGAVNELSRYRIGTVGHPLPGTEITIADDGEVLL
RSPSVMTGYHNLPDQTAEALDADGFLHTGDIGELDADGYLKITDRKKDLFKTSGGKYVAP
QPIEGRLLAVCPYVSQAVVHGDGRNYCTALLTLDADALRGWAANNGLAGREHAELVASPE
VHALVQGYVDELNAKLNRWETIKKFTILDRELTVDDGELTPSMKIRRKDVERLHRDALDA
LYES
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctacggcgtccgccgctccgagcgtcgcccggatgttccacgaccgggtccac
gcctcggccgaccgcgaggccttccgcgtccccgagtccgacggcacctggcgcgcgatc
acctggggcgagacgggcgaacgcgtcggccggctcgcggcggggctcatcgcgctcggt
gtcgaggcgggcgaccgcgtcgcgatcatggccggcacccgctacgagtggatcgtcgcc
gacctcgccatcatgtgcgcgggcgcggcgaccacgaccgtctacccgacgacgggcgcg
cccgacgtcgcgttcatcctggccgactccggcagccgcgtcgtgttcgccgaggacgag
acccaggtcgcgaagctgcgtgcgcaccgcgacgagctgcccgacgtcggcgtcgtcgtg
ctcctcgacggcacccccgaggacgacgacgactgggtgatcacggtcaccgacctcgcc
gcccgcggccgggcgctcaccgagacctcgcccgacgccgtggccgaccgcatcgacggc
atctcccccgacgacctggccacgctgatctacacctccggcacaaccggccgcccgaag
ggagtgcggctgccgcagaaggcctggacctatcagggcgacgcgctcaccaagctcgac
ctgtgccgtcccgacgacctgcagtacctgtggctcccgctcgcccactcgttcggcaag
gtcctgctcgcggcacagctcgcgatcggcttcaccacggcggtcgacgggcgcgtcgac
cggatcgtcgagaacatggcggtcgtgcggccgacgatgatggccgccgcaccccgcatc
ttcgagaaggcgcacgcccgcatcgtcaccacgatcgccgccgagggcgggccgaaggcc
acgctgttcacctgggcgatgtcggtgggccgcaaggtgagcgacctgaagctggccggc
aggcgcgtgccgccgctgctcgccgcgcagcaccggctggccgacgcgctggtcctgtcg
aagatccgcgcccgcttcggcggccgggtccgcttcttcatctccggttccgcggcactg
gccccggacctcgcgcactggttccacgcagccggcgtcctcatcctcgagggctacggg
atgaccgagaacgcggcgggcggggcggtcaacgagctgagccggtaccggatcggcacg
gtcggacacccgttgcccggcacggagatcacgatcgccgacgacggcgaggtcctgctg
cgcagccccagcgtcatgaccggctaccacaacctgcccgaccagaccgccgaggcgctc
gacgccgacggcttcctgcacaccggcgacatcggcgagctcgacgccgacggctacctg
aagatcaccgaccgcaagaaggacctgttcaagacctccggcggcaaatacgtcgcgcca
cagccgatcgagggccggctgctggcggtgtgcccgtacgtcagccaggccgtcgtgcac
ggcgacggacgcaactactgcacggccctgctcaccctcgacgccgacgcgctgcgcggc
tgggccgcgaacaacgggctggccggccgcgagcacgcggagctggtagcgtcgcccgag
gtgcacgcactcgtgcagggctacgtcgacgagctcaacgcgaagctcaaccgctgggag
acgatcaagaagttcacgatcctcgaccgcgagctcaccgtcgacgacggcgagctgacg
ccgagcatgaaaatccggcgcaaggacgtcgagcggctccaccgcgacgcgctggacgcc
ctctacgagagctga
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