Pseudonocardia dioxanivorans: Psed_0258
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Entry
Psed_0258 CDS
T01479
Name
(GenBank) ABC-type transporter, periplasmic subunit
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psed_0258
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdx02000
]
Psed_0258
Transporters [BR:
pdx02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Psed_0258
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
NTS_2
Motif
Other DBs
NCBI-ProteinID:
AEA22533
UniProt:
F4CNS1
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All DBs
Position
complement(302362..303984)
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AA seq
540 aa
AA seq
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MRVRRRTRTVALAAAAVATALALAACGSSPTAEKAPGNAGLDVSHPTGGDKETEGTPTPG
GTLVVGMYTEARSFDPTIGSNLIASAVYDSLLRMDAAGNPQPFLAESMTTPDQGTTWVLK
LRPNVTFQDGTPFNSQAVIFNVNRQLTNPAALGHLYTEPIASMDPTDDLTVTFHLKRPVG
SFPVDFALPFSSGNLGTIASPTAIQKEGANYGRNPVGAGPLQFVDWIPNNKIDVKRFPNY
WQKGKPYLDAIQFRPLSDTDTRYASVVNGDIDLDIGGFFQEVQRSSADPNLRTYYGPGGD
GEFFYLNMHKAPFDDPRMRQAVAMAIDPKALNATQYGNVGSLATTAFAPGDPNYSAKAAD
AYPKYDPDKAKQLVADYKASGGDPSVEIEEGTSAVNIQYGQFMQAQLAAVGIDATVHTDD
ISTLITTVVQGGQFQMVQWISGPYENPYPFMFNQFHTGGINNYGKYSNPKVDALLDDAVG
TSDPAERASDYQQAQELINADLPVLWMARAAKAAIARPNVKGVERYLSSELWFADTWKSS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgtccgcaggagaacgaggacggtcgcgctcgccgcggcggccgtcgcgacggcg
ctggcgctcgccgcgtgcggcagctccccgaccgccgagaaggcacccggcaacgccggg
ctcgacgtgtcgcacccgaccggcggggacaaggagaccgagggcacgccgacgccgggc
ggcacgctggtcgtcgggatgtacaccgaggcgcggtcgttcgacccgacgatcggctcc
aacctgatcgcgtcggccgtctacgactcgctgctgcggatggacgcggcgggcaaccca
cagccgttcctcgcggagtcgatgaccacaccggaccagggcacgacctgggtgctgaag
ctgcgaccgaacgtcacgttccaggacgggacgccgttcaactcgcaggcggtgatcttc
aacgtcaaccggcagctcaccaatcccgccgcgctcggccacctctacaccgagcccatc
gcgtcgatggacccgaccgacgacctgacggtgaccttccacctgaagcggcccgtcggc
tccttcccggtcgacttcgcactgccgttctcctcgggcaacctcggcacgatcgcgtca
ccgacggcgatccagaaggagggcgcgaactacgggcgcaaccccgtcggcgccggcccg
ctccagttcgtcgactggatcccgaacaacaagatcgacgtcaagcggttcccgaactac
tggcagaagggcaagccgtacctcgacgcgatccagttccggccgctgtcggacaccgac
acccgctacgcctccgtcgtcaacggcgacatcgacctcgacatcggcggcttcttccag
gaggtccagcggtcgtcggccgacccgaacctgcgcacctactacggcccgggcggcgac
ggcgagttcttctacctcaacatgcacaaggcgccgttcgacgacccgcggatgcggcag
gccgtggcgatggccatcgacccgaaggcgctcaacgccacgcagtacggcaacgtcggc
tcgctggcgacgacggcgttcgcgcccggcgaccccaactacagcgccaaggccgccgac
gcctatccgaagtacgacccggacaaggccaaacagctcgtcgccgactacaaggcgagc
ggcggcgacccctcggtggagatcgaggagggcacgtcggcggtcaacatccagtacggc
cagttcatgcaggcccagctggcggccgtcggcatcgacgcgacggtccacaccgacgac
atctcgacactgatcaccaccgtcgtgcagggcgggcagttccagatggtccagtggatc
agcggaccgtacgagaacccgtacccgttcatgttcaaccagttccacacgggcggtatc
aacaactacgggaagtactcgaacccgaaggtcgacgcgctgctcgacgacgccgtcggc
acgtccgacccggccgagcgggcgagcgactaccagcaggcgcaggagctgatcaacgcc
gacctgcccgtgctgtggatggcccgcgccgcgaaggcggccatcgcccggccgaacgtg
aagggagtcgagcgctacctgtcgagcgagctctggttcgccgatacgtggaagagcagc
tga
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