Pseudonocardia dioxanivorans: Psed_0398
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Entry
Psed_0398 CDS
T01479
Name
(GenBank) helicase/secretion neighborhood putative DEAH-box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
Psed_0398
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
DEAD
MZB
WHD_HRQ1
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEA22670
UniProt:
F4CIS5
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Position
438685..441036
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AA seq
783 aa
AA seq
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MSVTDASRAVGAGTGRGDRLLARVLAGSDVGDVVSPLRHSVQLPARPGRPAAWPGWVPAV
VVDALRAHGIDRPWTHQVEGAELAHAGRDVVVATGTASGKSLVYQLPVLTRFVADRRATA
LYLSPTKALAADQLRALEALDVPDVRATTVDGDTPAEERDWARRNARWIYSNPDMLHRSI
LPRHASWATFLRRLSYVVVDECHTYRGVFGSHVALLLRRLLRVAARYGARPTIVLASATV
ADPGPFATVLTGRDVAAVTDDGSPRSARTVALWEPPLLPELSGENAAPVRRAAGTEAARM
LADLVVEGARTLAFVRSRRGAELTAMGARRLLAEAAPELVGRVESYRSGYLPEERRELEA
ALAGGRLLGVASTNALELGMDIAGLDAVVVAGFPGTRASFWQQAGRAGRAAEEALVVLVA
RDDPMDTYLVHHPDALLGAPVERCVLDPANPYVLAPHLACAAAELPLTAADLDGVFAGTP
AEAVLDALVDDGVLRRRPTGWFWPSASEWPASSVDIRGSGLGQIALVEAGTGRMLGTVDA
GSAPATAHPGAVYLHRGESYVVDSLDLDAGLALVHPDNPDWRTDARSTADVEIVAELCRS
EHGPVGVSYGETRVTTQVVGYQRRALDGRVLETVPLDMPEQTLDTRAVWYTIDDAALADA
GIVPARIPGALHAAEHAAIGLLPLFAICDRWDIGGMSTALHPQTGLPTVFVHDGHPGGAG
LAERGHGVMQRWLAATRAAIAECECRTGCPSCVQSPKCGNGNNPLDKAGAVVVLDLVLGA
LRG
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtgacggacgcgtcgcgcgccgtgggagccggcacggggcggggcgaccggctg
ctcgcgcgggtcctcgccgggtccgacgtcggggacgtcgtctcgccgctgcggcacagc
gtgcagctgcccgcgcgtcccggcaggccggcggcgtggcccgggtgggtgccggccgtc
gtcgtcgacgccctgcgcgcccacggcatcgaccggccgtggacgcaccaggtcgagggg
gccgagctcgcccacgcgggccgggacgtcgtcgtcgccaccgggacggcgtcggggaag
tcgctggtctaccagctgcccgtgctcacccggttcgtcgccgaccgccgcgcgaccgcg
ctgtacctctcgcccaccaaggcgctggccgccgaccagctgcgcgccctcgaggcgctc
gacgtgcccgatgtgcgggcgacgaccgtcgacggcgacaccccggccgaggagcgcgac
tgggcccggcgcaacgcgcgctggatatacagcaaccccgacatgctgcaccggtcgatc
ctgccccggcacgcgagctgggcgaccttcctgcgccggctcagctacgtcgtggtcgac
gagtgccacacctaccgcggggtcttcggctcgcacgtggcgctgctgctgcgccggctg
ctgcgggtcgccgcccgctacggcgcgcggccgacgatcgtgctcgcctccgcgaccgtc
gccgatcccgggccgttcgcgacggtgctcaccggccgcgacgtcgccgccgtgaccgac
gacggctcgccccgctccgcgcggaccgtcgcgctctgggaaccgccgctgctgcccgaa
ctgtcgggggagaacgcggcgccggtgcgccgcgccgccgggaccgaagccgcgcggatg
ctggccgacctcgtcgtcgagggcgcccggaccctggcgttcgtccggtcgcggcgcggt
gcggagctgacggcgatgggggcgcggcggctgctcgccgaggccgcgcccgagctggtc
ggccgcgttgagtcctaccgcagcggctacctgcccgaggagcgtcgcgagctggaggcc
gccctggccggtggccggctgctcggcgtcgcctcgaccaacgcgctcgagctggggatg
gacatcgccgggctcgacgcggtcgtcgtcgccgggttcccggggacgcgagcgtcgttc
tggcagcaggcggggcgtgccgggcgggcggcggaggaggccctcgtcgtcctcgtggcc
cgcgacgacccgatggacacctacctcgtccaccaccctgacgcgctgctcggtgcgccc
gtcgaacggtgcgtgctcgaccccgccaacccctacgtcctggcgccgcacctggcctgt
gcggcggccgagctcccgctcacggcggccgacctcgacggtgtcttcgccggcacgccc
gccgaggcggtcctcgacgcgctggtcgacgacggtgtcctgcgcaggcggcccaccggc
tggttctggccgtcggccagcgagtggcctgcgtcgtcggtcgacatccgggggtccggg
ctcgggcagatcgcgctcgtcgaggccgggaccgggcggatgctgggcaccgtcgacgcc
ggctccgcccccgccaccgcacaccccggcgcggtgtacctgcaccgtggggagagctac
gtcgtcgactcgctggacctcgacgccgggctcgcgctcgtccaccccgacaaccccgac
tggcgtaccgacgcccggtccaccgccgacgtcgagatcgtcgccgagctgtgccggtcc
gagcacgggccggtcggcgtgagctacggcgagacccgggtgaccacgcaggtcgtcggc
taccagcggcgggccctcgacggccgggtgctggagacggtgccgctcgacatgcccgag
cagaccctggacacccgcgcggtctggtacacgatcgacgacgcggccctcgccgacgcc
gggatcgtccctgcacggatcccgggggcgctgcacgccgccgagcacgccgcgatcggg
ctgctcccgctcttcgcgatctgcgaccggtgggacatcggcggcatgtcgacggccctg
cacccccagaccgggctgccgaccgtgttcgtccacgacgggcatcccggtggcgcggga
ctcgcggagcgcgggcacggcgtcatgcagcggtggctcgccgccacccgggccgcgatc
gccgagtgcgagtgccggaccggctgcccgtcctgcgtccagtccccgaagtgcgggaac
ggcaacaacccgctggacaaggcgggggcggtcgtcgtgctggacctggtgctgggcgcc
ctgcggggctga
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