Pseudonocardia dioxanivorans: Psed_1720
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Entry
Psed_1720 CDS
T01479
Name
(GenBank) Integrase catalytic region
KO
K07482
transposase, IS30 family
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Psed_1720
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Gene cluster
GFIT
Motif
Pfam:
HTH_38
HTH_23
rve
HTH_28
HTH_32
Terminase_5
HTH_29
Sigma70_r4_2
HTH_AraC
HTH_50
HTH_66
HTH_31
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AEA23955
UniProt:
F4CJX3
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Position
complement(1810418..1811602)
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AA seq
394 aa
AA seq
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MELRARGWSIQAAAREVGTSRTSGANWARGYKTYRDGRVVGFVAPLDRLAVREISSRYLS
QDERFQIADLRRMGWSIRRIAAHLGRSPSTISRELRRNARNDGGYRPFDAHRRAVARRAR
QHRRRLDTNHELRALVGELLAQRWSPQQISRHLRARFPELPGMRLCHESIYQAIYEPGSS
LVRPSRVPSVHRSPLRTGRDHRRAHQKVERRRPRFAQPMLTIHQRPFRPEDRSEAGHWEG
DLIVGKDHGSAIGTLVERTTRLVRLLHLPQRDAHTLHRVLAMRMGDLPPSLLRSITWDQG
TEMARHTDITATLAVPVYFCDAHAPWQRGSNENTNGLLRQYFPKRTDLSIHSPRHLKAVE
NELNTRPRMVLADRAPAELFAALLASSSEPSLRR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgcgcccgcggctggagcatccaggccgcggcacgggaggtcggcacgtcc
cgcacgtccggggcgaactgggcccgcggctacaagacctaccgcgacgggcgggtggtc
gggttcgtggcgccactggatcgcctcgccgtgcgcgagatcagctcgcgctacttatcc
caggacgagcgtttccagatcgccgacctgcgccggatgggctggagcatccgacgcata
gccgcccacctcggacgctcaccctcgaccatctcccgcgagctgcgccgcaacgcacgc
aacgacggcggctaccgcccgttcgacgcccaccgccgggccgtggcccgccgagcccgc
cagcaccgacgccgtctggacaccaaccacgagctgcgagccctcgttggagagctactc
gcacagcggtggagccctcagcagatctcccgtcacctgcgggcccgcttcccggaactc
ccgggcatgcgtctgtgtcacgaaagcatctaccaggcgatctatgagcccgggtcctct
ctcgtccggccctcaagggtgccgtcggtgcatcgatcgccgctgcggaccgggcgcgat
catcgccgagcgcaccagaaggtcgagcggcgcaggccccgcttcgcgcagccgatgctg
accatccaccagcgcccgttccgacccgaggaccggtccgaggccgggcactgggagggc
gacctgatcgtgggcaaggaccacggttcggcgatcggcaccctggtcgagcgcacgact
cgcctggtccggctgctacaccttcctcagcgtgacgcacacacgctgcaccgcgtcctc
gcgatgaggatgggcgacctgccaccgtcgctgctgcgctcgatcacctgggaccagggc
accgagatggcgagacacaccgacatcaccgccaccctcgcggtccccgtctacttctgc
gacgcccacgcgccctggcagcggggatcgaacgagaacaccaacgggctgctgcgtcag
tacttccctaagcggaccgacctgagcatccacagcccgcggcacctcaaggccgtcgag
aacgagctcaacacccgccctcgaatggttctcgccgaccgcgctcccgccgagctgttc
gctgcgttgctagcctcttcgtccgagccatcgttgcgacgttga
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