Pseudonocardia dioxanivorans: Psed_1745
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Entry
Psed_1745 CDS
T01479
Name
(GenBank) ABC-type transporter, periplasmic subunit
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psed_1745
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdx02000
]
Psed_1745
Transporters [BR:
pdx02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Psed_1745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
NMT1
Motif
Other DBs
NCBI-ProteinID:
AEA23980
UniProt:
F4CMJ6
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All DBs
Position
1842607..1844139
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AA seq
510 aa
AA seq
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MARPRTLLRLAALAAAAAVALAGCGAGAGSASGSTLKWGFSLPTSWDPVTSSTGNDINTI
SLVYASLTQLDEKATAIPGLARSWDYNADGTAVTFHLRPGLTFTDGTPLDADAVKQSLLR
GKTQQNSLLKDQLATISDITTSGDLDVTLHLAAPDYQVPNLLAGKTGEIVSPAAFTKDAA
AIPTAPVGAGPFKFESFVPESKAVLVKNPGYWNADAIKIDRLELTPTTDPATVIAAVQSG
ALDVSFIPGNQIPQAKAAGLEVDVIDSMQVNQVDVNSTLEPLTDRRVVDALKYAIDREQI
IDVINGGVGDAVSQPFPKGYVAYDPSLDTAFAYDPAKARQMLADAGYAPGQLSLTVTVNA
LSQATAELVQQQLQAVGVNATIKVVPPGSSTWQQEVYLGRKAQFALDGTVGRESPVQNLM
VVYGSQGLMNTSKVATPEFLAALDAVRRTPLDAPNYPQVLQAAVRAGVQMSPSFSLGTQP
RVAVRSKKVSPLPHFLSQYRWEGVTVGSPS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcccccgcaccctgctcagactggccgcgctcgccgcggccgccgccgtcgcc
ctcgccggttgcggcgccggcgccggctcggcgtccggatcgaccctgaagtggggcttc
tccctgcccacgtcgtgggacccggtcacgtccagcaccggcaacgacatcaacacgatc
agcctcgtctacgcctcgctcacccagctcgacgagaaggccaccgccatcccgggcctg
gcccggtcgtgggactacaacgccgacggcaccgccgtcacgttccacctgcggcccggc
ctgaccttcaccgacggcaccccgctcgacgccgacgcggtgaagcagagcctgctgcgc
ggcaagacccagcagaactcgctgctcaaggaccagctggcgacgatctccgacatcacc
acctccggtgacctcgacgtcaccctgcacctggcggcgccggactaccaggtgcccaac
ctgctggcgggcaagaccggcgagatcgtcagccccgcggcgttcaccaaggacgcggcc
gcgatcccgaccgcgccggtcggggccggccccttcaagttcgagtcgttcgtgccggag
tcgaaggccgtgctggtcaagaacccgggctactggaacgccgacgcgatcaagatcgac
cgcttggagctcacccccacgaccgacccggcgacggtcatcgccgccgtgcagtccggg
gccctcgacgtctcgttcatccccggcaaccagatcccgcaggccaaggccgcggggctc
gaggtcgacgtcatcgactcgatgcaggtcaaccaggtcgacgtcaacagcaccctcgaa
ccgttgaccgaccgccgcgtcgtcgacgccctcaagtacgcgatcgaccgcgagcagatc
atcgacgtgatcaacggcggcgtcggcgacgccgtctcccagccgttcccgaagggctac
gtcgcctacgacccgagcctggacaccgccttcgcctacgacccggccaaggccaggcag
atgctcgccgacgccggctacgcgccggggcagctctcgctcacggtgaccgtcaacgcg
ctctcgcaggcgaccgccgagctcgtccagcagcagctgcaggcggtcggcgtcaacgcg
acgatcaaggtggtgccgccgggctcgtcgacctggcagcaggaggtctacctgggccgc
aaggcgcagttcgcgctcgacggcaccgtcggccgcgagtcgccggtgcagaacctcatg
gtggtctacgggtcgcagggcctgatgaacacgagcaaggtcgcgacgccggagttcctc
gccgcgctcgacgcggtgcgccgcaccccgctcgacgccccgaactacccgcaggtgctg
caggccgcggtgcgcgcgggcgtgcagatgtcgccgagcttctccctcggcacccagccg
cgcgtcgcggtgcgcagcaagaaggtctcgccgctgccgcacttcctgtcgcagtaccgg
tgggagggcgtcacggtggggagcccgtcgtga
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