Pseudonocardia dioxanivorans: Psed_1834
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Entry
Psed_1834 CDS
T01479
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdx03032
]
Psed_1834
03036 Chromosome and associated proteins [BR:
pdx03036
]
Psed_1834
03400 DNA repair and recombination proteins [BR:
pdx03400
]
Psed_1834
DNA replication proteins [BR:
pdx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Psed_1834
Chromosome and associated proteins [BR:
pdx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Psed_1834
DNA repair and recombination proteins [BR:
pdx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Psed_1834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
CsgH
Motif
Other DBs
NCBI-ProteinID:
AEA24068
UniProt:
F4CR10
LinkDB
All DBs
Position
1938771..1939328
Genome browser
AA seq
185 aa
AA seq
DB search
MNKTQLVDALAARLGDRRTAASAVDGVLSIIVDTVGSGGSVSLTGFGVFEARARAARVAR
NPRTGDTVAVPPTVVPSFRPGIAFKATVSGNGAAAEGARPAPARRPRAAAAAPAAPARAT
RSRAKAGSSFAAEKPAPKPAAKSATKTAAKTTAAEAKAATPTQAKAAAAKAEKPAAKPKK
AKAKK
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacgcagctcgtggacgcgctcgcggcgcggctcggcgaccggcgcaccgcg
gcctccgcggtcgacggagtgctctcgatcatcgtggacacggtcggctcgggtggttcg
gtgtcgctcaccgggttcggcgtcttcgaggcgcgtgcccgggccgcccgggtcgcccgc
aacccccggaccggggacacggtcgcggtgccgccgacggtcgtgccgtcgttccggccc
ggtatcgccttcaaggcgaccgtgtccggcaacggtgccgccgccgaaggcgcgcggccc
gccccggcccgccggccgcgtgcggctgctgccgcacccgcggccccggccagggcgacg
cgcagccgggccaaggccggctcgtcgttcgccgcggagaagccggcccccaagccggcg
gcgaagtccgcgacgaagacggcggccaagaccaccgccgccgaggccaaggcagcgacc
cccacccaggccaaggccgcggcggcgaaggcggagaagccggctgcgaagccgaagaag
gccaaggcgaagaagtga
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