Pseudonocardia dioxanivorans: Psed_1840
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Entry
Psed_1840 CDS
T01479
Name
(GenBank) Cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx00260
Glycine, serine and threonine metabolism
pdx00270
Cysteine and methionine metabolism
pdx00450
Selenocompound metabolism
pdx00670
One carbon pool by folate
pdx01100
Metabolic pathways
pdx01110
Biosynthesis of secondary metabolites
pdx01230
Biosynthesis of amino acids
Module
pdx_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Psed_1840
00270 Cysteine and methionine metabolism
Psed_1840
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Psed_1840
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Psed_1840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdx04147
]
Psed_1840
Enzymes [BR:
pdx01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
Psed_1840
Exosome [BR:
pdx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Psed_1840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
DUF3572
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AEA24074
UniProt:
F4CR16
LinkDB
All DBs
Position
1945588..1946688
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AA seq
366 aa
AA seq
DB search
MSEPLGDGTRVIHGGARVPAVGDPLHPGPVLSSTFALGSGSGDPPTDFYGRAGNPTWRAL
EAAIGDLEGGECTLFASGMAAVAAVLGTCARPGTVVLPSDGYYLARTLASDLGLPVRLVP
TASAPDATFTDASLVLVETPSNPGLDVCDIAVVAARAHAAGALVAVDNTTATPLGQRPLE
LGADLVVASDTKALAGHGDVVLGHVTTADPALTEAVRTARTRGGAVPGPMEVWLAHRGLG
TLDLRLERQAANARALATALREHPAVSDVRWPGLSDDPAHAVAARQMRRWNGVLRFTLAD
ADAVGRFLAASGLVESATSFGGLRTSADRRQRWGDDVAPGLVRLSAGCEDSRDLVTDVLA
ALDQMG
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagccgctgggcgacggcacccgggtgatccacggcggcgcccgcgtgcccgcc
gtcggggacccgctacatccgggtcccgtgctgtcgtcgacgttcgccctgggcagcggg
agcggcgacccgccgaccgacttctacggccgcgcaggcaaccccacctggcgggcgctg
gaggccgcgatcggcgatctcgagggcggggagtgcacgctcttcgcctcgggaatggcc
gccgtcgccgcggtcctcgggacgtgcgcgcggccggggacggtcgtgctgccctccgac
gggtactacctcgcccgcacactggcctcggacctcgggctgccggtgcggctcgtaccg
acggcgtcggcccccgacgccacgttcaccgacgcgtcgctcgtcctggtcgagaccccg
tcgaaccccgggctggacgtctgcgacatcgccgtcgtcgccgcgcgggcgcacgccgcg
ggcgcgctcgtggccgtcgacaacacgacggccacgccgctggggcagcggccgctcgag
ctgggagccgacctcgtcgtcgcgagcgacacgaaggcgctcgcgggtcacggggacgtc
gtgctcgggcacgtcacgacggccgaccccgccctgacggaggccgtccggaccgcgcgg
acccgcggcggagcggtgcccgggccgatggaggtctggctcgcgcatcggggcctgggc
acgctggacctgcggctggagcggcaggcggccaacgcccgcgcgctcgcgacggcgctg
cgggagcatccggcggtgtccgacgtccgctggcccgggctgtccgacgacccggcgcac
gccgtcgccgcgcggcagatgcgcaggtggaacggggtgctgcggttcacgctggccgac
gcggacgcggtcgggcggttcctcgccgcgtccggactggtcgagtcggcgacgagtttc
ggcgggctgcggacgtcggcggaccggcggcagcgctggggcgacgacgtggcgccggga
ctggtgcggctctcggcgggctgcgaggactcccgcgacctggtcacggacgtgctggcc
gccctggaccagatgggctga
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