Entry |
|
Name |
(GenBank) DNA polymerase III, delta subunit
|
KO |
|
Organism |
pdx Pseudonocardia dioxanivorans
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pdx00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psed_2012
03430 Mismatch repair
Psed_2012
03440 Homologous recombination
Psed_2012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:pdx03032]
Psed_2012
03400 DNA repair and recombination proteins [BR:pdx03400]
Psed_2012
Enzymes [BR:pdx01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psed_2012
DNA replication proteins [BR:pdx03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Psed_2012
DNA repair and recombination proteins [BR:pdx03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Psed_2012
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2144900..2145928
|
AA seq |
342 aa
MWEAGHGCGPSWATMVDVTPAASDGRPEPVNLVIGEEELLAERAVQEVVVRARAADPETE
VRRLRTSEVDAQELAEHLSPSLFAEGRVVVLSAAQEAGKDMVAAVLRYAAEPADGIVLVL
QHQGGARGKSFADDLRKAGAAVTRCERLTRPAERADFVRAEVRRLGGKITGDAVDVLLEA
VGSELRELASAAGQLVADTGGVVDEKAVRRYHRGRAEATGFTVADKVVAGDREGALEALR
WALVLGVAPVLVADALADAVRTLAKVGAAGRGDPNRLAGTLGMPPWKIRKAQGQVRSWRP
EGLTVAFAAAAEANADVKGAAADPEFALERAVRRIIDARDIR |
NT seq |
1029 nt +upstreamnt +downstreamnt
atgtgggaggcgggtcacggctgcggcccgtcgtgggcgacgatggtggacgtgacccca
gccgcctcggacggccgccccgagcccgtcaacctcgtcatcggcgaggaggagctgctc
gccgagcgggccgtgcaggaggtcgtcgtccgggcgcgcgcggccgaccccgagaccgag
gtccggcggctgcgcaccagcgaggtcgacgcccaggagctggccgagcacctcagcccg
tcgctgttcgccgaggggcgcgtggtcgtcctctccgcggcgcaggaggcgggcaaggac
atggtcgccgccgtacttcgctacgccgccgagcccgccgacgggatcgtgctggtcctg
cagcaccagggtggtgcccgtggcaagtccttcgccgacgacctgcgcaaggccggagcg
gccgtcacccgctgcgagcggctgacccgcccggccgagcgggccgacttcgtcagggcc
gaggtccgccggctcggcgggaagatcaccggcgacgcggtcgacgtgctgctcgaggca
gtcggttcggagctgcgggagctggcatcggcggccggccagctggttgcggacaccggc
ggggtcgtcgacgagaaggccgtccggcgctaccaccgcggccgggccgaggcgacgggg
ttcaccgtcgcggacaaggtcgtggccggcgaccgcgagggcgcgctggaggcgctgcgg
tgggcgctggtgctcggcgtcgcgccggtgctcgtcgccgacgctctcgccgacgccgtc
cgcaccctggcgaaggtcggtgcggccggacgcggcgaccccaaccggctcgccgggacc
ctcgggatgccaccgtggaagatccgcaaggcgcaagggcaggtgcggtcgtggcggccg
gaggggctcaccgtcgcgttcgcggccgccgccgaggccaatgccgacgtcaagggcgcg
gccgccgacccggagttcgccctggagcgcgcagtgcgtcgcatcatcgacgcccgcgac
atccgctga |