Pseudonocardia benzenivorans: Psed_2012
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Entry
Psed_2012 CDS
T01479
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pdx
Pseudonocardia benzenivorans
Pathway
pdx03030
DNA replication
pdx03430
Mismatch repair
pdx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psed_2012
03430 Mismatch repair
Psed_2012
03440 Homologous recombination
Psed_2012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdx03032
]
Psed_2012
03400 DNA repair and recombination proteins [BR:
pdx03400
]
Psed_2012
Enzymes [BR:
pdx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psed_2012
DNA replication proteins [BR:
pdx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Psed_2012
DNA repair and recombination proteins [BR:
pdx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Psed_2012
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
DMPK_coil
Motif
Other DBs
NCBI-ProteinID:
AEA24239
UniProt:
F4CWY4
LinkDB
All DBs
Position
2144900..2145928
Genome browser
AA seq
342 aa
AA seq
DB search
MWEAGHGCGPSWATMVDVTPAASDGRPEPVNLVIGEEELLAERAVQEVVVRARAADPETE
VRRLRTSEVDAQELAEHLSPSLFAEGRVVVLSAAQEAGKDMVAAVLRYAAEPADGIVLVL
QHQGGARGKSFADDLRKAGAAVTRCERLTRPAERADFVRAEVRRLGGKITGDAVDVLLEA
VGSELRELASAAGQLVADTGGVVDEKAVRRYHRGRAEATGFTVADKVVAGDREGALEALR
WALVLGVAPVLVADALADAVRTLAKVGAAGRGDPNRLAGTLGMPPWKIRKAQGQVRSWRP
EGLTVAFAAAAEANADVKGAAADPEFALERAVRRIIDARDIR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaggcgggtcacggctgcggcccgtcgtgggcgacgatggtggacgtgacccca
gccgcctcggacggccgccccgagcccgtcaacctcgtcatcggcgaggaggagctgctc
gccgagcgggccgtgcaggaggtcgtcgtccgggcgcgcgcggccgaccccgagaccgag
gtccggcggctgcgcaccagcgaggtcgacgcccaggagctggccgagcacctcagcccg
tcgctgttcgccgaggggcgcgtggtcgtcctctccgcggcgcaggaggcgggcaaggac
atggtcgccgccgtacttcgctacgccgccgagcccgccgacgggatcgtgctggtcctg
cagcaccagggtggtgcccgtggcaagtccttcgccgacgacctgcgcaaggccggagcg
gccgtcacccgctgcgagcggctgacccgcccggccgagcgggccgacttcgtcagggcc
gaggtccgccggctcggcgggaagatcaccggcgacgcggtcgacgtgctgctcgaggca
gtcggttcggagctgcgggagctggcatcggcggccggccagctggttgcggacaccggc
ggggtcgtcgacgagaaggccgtccggcgctaccaccgcggccgggccgaggcgacgggg
ttcaccgtcgcggacaaggtcgtggccggcgaccgcgagggcgcgctggaggcgctgcgg
tgggcgctggtgctcggcgtcgcgccggtgctcgtcgccgacgctctcgccgacgccgtc
cgcaccctggcgaaggtcggtgcggccggacgcggcgaccccaaccggctcgccgggacc
ctcgggatgccaccgtggaagatccgcaaggcgcaagggcaggtgcggtcgtggcggccg
gaggggctcaccgtcgcgttcgcggccgccgccgaggccaatgccgacgtcaagggcgcg
gccgccgacccggagttcgccctggagcgcgcagtgcgtcgcatcatcgacgcccgcgac
atccgctga
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