Pseudonocardia dioxanivorans: Psed_2380
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Entry
Psed_2380 CDS
T01479
Name
(GenBank) RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdx03021
]
Psed_2380
Transcription machinery [BR:
pdx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Psed_2380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_Crp_2
HTH_23
MarR
Flg_hook
MarR_2
HTH_3
UBA_2
NirdL-like_HTH
HTH_24
DUF7343
LacI
Motif
Other DBs
NCBI-ProteinID:
AEA24585
UniProt:
F4CUC6
LinkDB
All DBs
Position
2531231..2532142
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AA seq
303 aa
AA seq
DB search
MLDNARPTAGPVPVDDDAVRTADHGAADHAADHTADPAADATELGPSEYADQMPLLQRYA
ALPADDPERERIREQLVLSFLPVVEHLARRYGNGYRVAAYDDLVQTGTVGLITAIDRWDP
ERAKGEFLGYLIPCVRGEILRYFRDRTWSMRVPRRLKDLGVAIGKASGPLTQELGRAPRP
SELAAHLGVDREEVIEALAAAADRRATPLFPVTHDDDAPEERVGTVEKAYDHVEYAIALK
PLIEQLPERERLILTLRFFGDQTQSQIAARVGVSQMHVSRLLARTLERLREGLAATNDDL
AST
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacaacgcccgcccgaccgccggcccggtgccggtggacgacgatgccgtccgc
accgccgatcacggcgccgcggaccacgcggcggaccacacggccgacccggccgccgat
gctaccgagctgggccccagcgagtacgccgaccagatgccgttgctgcagcgctacgcc
gcgctcccggccgacgatcccgagcgcgagcgcatccgcgagcagctggtgctgtcgttc
ctgccggtggtcgagcacctcgcccgccgctacggcaacggctatcgggtcgccgcgtac
gacgacctcgtgcagaccggaaccgtcgggctgatcaccgcgatcgaccgctgggacccc
gagcgcgcgaagggcgagttcctcggctacctcatcccgtgcgtccgcggcgagatcctg
cggtacttccgcgaccggacctggtcgatgcgggtgccgcggcggctgaaggacctcggg
gtcgccatcggcaaggcctccggcccgctgacccaggagctcggccgcgccccgcggccg
agcgagctcgcggcccacctcggcgtcgaccgcgaggaggtcatcgaggcgctcgccgcc
gcggccgaccgccgggcgacgccgctgttcccggtcacccacgacgacgacgcacccgag
gaacgtgtcgggacggtcgagaaggcctacgaccacgtcgagtacgcgatcgcgctcaaa
ccgttgatcgaacagcttcccgagcgtgaacgtctgatcctgacgctgcggttcttcggc
gaccagacccagtcgcagatcgccgcgagggtcggggtctcacagatgcacgtgtcgcgg
ctgctcgcgcgcaccctcgaacgcctgcgggaagggctggccgcgaccaacgatgacctc
gcctccacgtaa
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