Pseudonocardia dioxanivorans: Psed_2831
Help
Entry
Psed_2831 CDS
T01479
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx03030
DNA replication
pdx03430
Mismatch repair
pdx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psed_2831
03430 Mismatch repair
Psed_2831
03440 Homologous recombination
Psed_2831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdx03032
]
Psed_2831
03400 DNA repair and recombination proteins [BR:
pdx03400
]
Psed_2831
Enzymes [BR:
pdx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psed_2831
DNA replication proteins [BR:
pdx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Psed_2831
DNA repair and recombination proteins [BR:
pdx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Psed_2831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AEA25031
UniProt:
F4CMT2
LinkDB
All DBs
Position
2994755..2998312
Genome browser
AA seq
1185 aa
AA seq
DB search
MTAASTDSFVHLHTHTEFSMLDGAARLDDLFRESAKMGMPALAMTDHGNVYGAYEFWRKA
KAAGVKPIIGMEGYLSPGSRHERKRATLGGQTVSDDNPGEMYTHMTLLAENTEGMHNLFR
LSSLASLEGYYYKPRMDRELLETYGKGIIATTGCPSGEVARLLQQDRYDDACQAASDYRD
IFGRDNFYCELMDHGIEIEKRVQEDLFRLKKELGLPGLATNDLHYTYAEDTKPHEVLLCV
QTGKTLADPNRFKFDAQDFYLKSAAEMRAQWDPIHPEACDNTLLIAERVDVSFTEGQDLM
PRAPVPEGETEESWLVKEVEKGLHRRFPNGVTEQYRKQAEYELSVIIQMGFPGYFIVTAD
LIQHAKKVGIRCGPGRGSAAGSLVAYVLGITDLDPIKHKLIFERFLNPERISMPDIDMDF
DERRRGEMIRYTTEKYGEDRIAQIITYSTIKAKAAIKDSARVLFGQPGYSVADRITKAMP
PAIMGKDIPLSGIFDPGHKRYSEATEVRALYEADPQVREIIDTARGLEGLKRQWGVHAAG
VIMSSKPLLDVIPIQRREADGAIITQFDMGACETLGLLKMDFLGLRNLTIIDDALENIEL
NGKPPLVIEDVELDDPKTYDLLARGDTLGVFQLDGGPMRDLLRRMAPTEFDDISAVGALY
RPGPMGANAHNDYADRKNKRQEVTPIHPELAEPLKDILGETYGLIVYQEQVMAIAQKLAG
YTLGKADLLRRAMGKKKKEILDKEYEGFAQGMKDHGYSADAVKTLWDILLPFSDYAFNRA
HSAAYGVVSYWTAYLKANYPAEYMAAVLTSVRDDKDKAAVYLAECRRMGITVLPPDVNES
VRNFAPVGDDIRFGLGAIRNVGFNVVDAIVAARKEKGAFSDFSDFLRKVDAVVCNKKVIE
SLIKAGAFDSLGHSRKGLLLVHADAIDAVMSTKKAASMGQFDLFGSMDGGDGDDSDPALA
GIFDVKVPTDEWDTKHRLAVEREMLGLYVSGHPLHGVEGVLAAKADTPIQNILDGTVGDG
AQVTVGGILAGVNRRVNKNGEPWASAQIEDLAGGIEVLFFPRCYQVVGIDVAEDAIVLVK
ARVSKRDDRVSLIANDLAVPDLAAAGEENSSPVAVSLAATRCTPPVVAKLKDVLSSHPGS
RPVHLSLVNGTRTTVLRLDDALRVTASSALMGDLKALLGPGCLGG
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgccagcacggacagcttcgtccacctgcacacccacaccgagttctcgatg
ctcgacggggccgcgcggctcgacgacctgttccgcgagtcggcgaagatgggcatgccg
gcgctggcgatgaccgaccacggcaacgtctacggcgcctacgagttctggcgcaaggcc
aaggccgccggggtcaagccgatcatcggcatggagggctacctgtcgccgggcagccgc
cacgaacgcaagcgcgccacgctcggcgggcagacggtcagcgacgacaacccgggtgag
atgtacacccacatgacgttgctggccgagaacaccgaggggatgcacaacctcttccgg
ctgtcgtcgctggccagcctcgagggctactactacaagccccgcatggaccgcgagctg
ctggagacctacggcaaggggatcatcgcgacgacgggctgcccgtcgggcgaggtcgcg
cgcctgctgcagcaggaccgctacgacgacgcgtgccaggccgcgagcgactaccgggac
atcttcggcagggacaacttctactgcgagctgatggaccacggcatcgagatcgagaag
cgggtccaggaggacctgttccggctcaagaaggagctcgggctgccgggcctcgcgacg
aacgacctgcactacacctacgccgaggacaccaagccgcacgaggtgctcctgtgcgtg
cagacgggcaagaccctcgccgaccccaaccgcttcaagttcgacgcgcaggacttctac
ctcaagtccgccgccgagatgcgcgcccagtgggacccgatccaccccgaggcctgcgac
aacacgctgctgatcgccgagcgcgtcgacgtctcgttcaccgagggccaggacctgatg
ccgcgcgcgcccgtccccgagggggagacggaggagtcgtggctggtcaaggaggtcgag
aaggggctgcaccggcgcttcccgaacggcgtcaccgagcagtaccgcaagcaggccgag
tacgagctgtcggtcatcatccagatgggcttccccggctacttcatcgtcaccgcggac
ctcatccagcacgccaagaaggtcggcatccggtgcgggcccgggcgtggctcggccgcc
ggctcgctcgtcgcctacgtcctcgggatcaccgacctcgacccgatcaagcacaagctg
atcttcgagcgcttcctcaaccccgagcgcatctcgatgcccgacatcgacatggacttc
gacgaacgtcggcgcggcgagatgatccgctacaccacggagaagtacggcgaggaccgg
atcgcgcagatcatcacctactccacgatcaaggcgaaggccgcgatcaaggactcggcg
cgcgtgctcttcggccagcccggctactcggtggccgaccggatcaccaaggccatgccg
cccgccatcatgggcaaggacatcccgctgtcgggcatcttcgacccggggcacaagcgc
tactccgaggccaccgaggtccgcgcgctctacgaggccgacccgcaggtccgcgagatc
atcgacaccgcacgcgggctcgagggcctcaagcggcagtggggcgtgcacgcggcgggc
gtgatcatgtccagcaagccgctgctcgacgtcatcccgatccagcgccgcgaggccgac
ggcgcgatcatcacgcagttcgacatgggcgcctgcgagacgctcgggctgctcaagatg
gacttcctcggcctgcgcaacctcacgatcatcgacgacgcgctggagaacatcgagctc
aacggcaaaccgccgctggtcatcgaggacgtcgagctcgacgacccgaagacctacgac
ctgctcgcccggggcgacaccctcggggtgttccagctcgacggcggcccgatgcgcgac
ctgttgcgccgcatggcccccaccgagttcgacgacatctccgccgtcggcgcgctgtac
cggcccggcccgatgggtgccaacgcgcacaacgactacgccgaccgcaagaacaagcgg
caggaggtcactccgatccacccggagctggccgagccgctcaaggacatcctgggcgag
acctacggcctgatcgtctaccaggaacaggtcatggcgatcgcccagaagctcgcgggc
tacaccctcggcaaggccgacctgctgcgccgggccatgggcaagaagaagaaggagatc
ctcgacaaggagtacgagggtttcgcccagggcatgaaggaccacggctactccgcggac
gcggtcaagacgctgtgggacatcctgctgccgttctccgactacgccttcaaccgtgcg
cactccgccgcgtacggcgtcgtgtcctactggacggcctacctcaaggccaactacccg
gccgagtacatggccgcggtgctcacgtccgtccgcgacgacaaggacaaggccgccgtc
tacctggccgagtgccgccgcatgggcatcaccgtgctgccgcccgacgtcaacgagtcg
gtgcgcaacttcgcccccgtcggcgacgacatccggttcggcctcggcgcgatccgcaac
gtcggcttcaacgtcgtcgacgcgatcgtggcggcccgcaaggagaagggcgcgttcagc
gacttctccgacttcctgcgcaaggtcgacgcggtcgtctgcaacaagaaggtcatcgag
tcgctgatcaaggcgggcgcgttcgactcgctggggcactcccgcaagggcctgctgctc
gtccacgccgacgcgatcgacgccgtgatgagcacgaagaaggccgcgtcgatgggccag
ttcgacctcttcggctcgatggacggcggcgacggcgacgactccgaccccgcgctggcc
gggattttcgacgtcaaggtccccaccgacgagtgggacaccaagcaccggctcgccgtc
gaacgcgagatgctcgggctctacgtgtcggggcatccgctgcacggcgtcgagggggtg
ctggcggcgaaggccgacaccccgatccagaacatcctcgacggcacggtcggcgacggc
gcgcaggtcaccgtcggcggcatcctcgcgggcgtcaaccggagggtgaacaagaacggc
gagccctgggcgtcggcgcagatcgaggacctcgccggtggcatcgaggtgctgttcttc
ccgcgctgctaccaggtcgtcgggatcgacgtggccgaggacgcgatcgtgctggtcaag
gcccgcgtctccaagcgcgacgaccgggtctcgctcatcgccaacgacctcgcggtgccc
gacctggccgcggcgggggaggagaactcctcgccggtcgcggtgagcctcgcggccacc
cggtgcacgccgcccgtcgtcgccaagctcaaggacgtgctctccagtcaccccggctcg
cggccggtgcacctgagcctggtcaacggcacccgcaccactgtcctgcggctcgacgac
gcgctgcgcgtcaccgcgagctccgcgctgatgggcgacctcaaggcgctgctcggaccg
ggctgcctcggcggctga
DBGET
integrated database retrieval system
