Pseudonocardia dioxanivorans: Psed_2891
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Entry
Psed_2891 CDS
T01479
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdx03016
]
Psed_2891
Enzymes [BR:
pdx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Psed_2891
Transfer RNA biogenesis [BR:
pdx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Psed_2891
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AEA25091
UniProt:
F4CMZ2
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All DBs
Position
complement(3060888..3062072)
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AA seq
394 aa
AA seq
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MPLLRPADGLPDVVADAGALERTAAAFAAGSGPVAVDAERASGFRYSQRAYLVQLRRAGA
GSALIDPIPLGSDLSALSPALTGPEWVLHAASQDLPCLAEVGLAPTSLFDTELAGRLAGL
PRVGLGPMVEQLLGLALEKGHGAADWSRRPLPEDWLVYAALDVEVLIELRDLLAGMLAEQ
GKSEFAAQEFEAVRTAAAPAPRAEPWRRTSGIHKVRKPRALAVVRALWEARDKLAAERDI
APGRVLPDAAIVDAAVNAPATPGALAAMPVFRGRSQRRLTSYWFAALERAAQLPAEELPR
ATVPGDGPPPVARWSDRDPDAAARLSAARSALADLAEKWSIPVENLLLPDLLRRLCWTPP
ADGDVAAALAAGGARPWQIALTAPLLEKAVAAKA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
gtgccgctgctgcgccctgccgacggcctgcccgacgtggtggccgacgccggggcgttg
gagcgcacggcggcggcgttcgcggcaggttccggcccggtcgcggtcgacgccgagcgc
gcgtccggcttccgctactcccagcgggcatacctggtgcagctgcgccgggcgggcgcg
ggatcggcgctgatcgacccgatcccgctgggttccgacctctcggcgctgtccccggcg
ctgacggggccggaatgggtgctgcacgccgcgtcgcaggatctcccgtgcctggccgag
gtcgggctcgccccgacctcgctgttcgacaccgagctcgccggccggctggccgggctc
ccccgcgtcgggctcgggccgatggtcgaacagctgctcgggctcgctctggagaagggt
cacggcgccgccgactggtcccggcggccgctgcccgaggactggctcgtctacgccgcg
ctcgacgtcgaggtgctcatcgagctgcgcgacctgctcgccgggatgctcgccgagcag
ggcaagtcggagttcgccgcgcaggagttcgaggccgtccgcaccgccgccgcgcccgcg
ccccgcgcggagccgtggcggcggacctcgggcatccacaaggtgcgcaagccgcgtgcg
ctcgcagtcgtccgcgcgctgtgggaggcccgcgacaagctggccgccgaacgcgacatc
gctcccggccgggtcctgcccgacgccgcgatcgtcgacgccgccgtcaacgcacccgcc
acaccgggcgcgctggcggcgatgccggtgttccgcgggcgctcgcagcggcggctcacg
tcgtactggttcgccgcgctggagcgggccgcccaattgcctgccgaggagctcccgcgc
gctacggtgcccggtgacggtccgccgccggtcgcgcgatggtccgaccgcgaccccgac
gcggccgctcggctctccgccgcccgcagcgcgttggccgacctcgccgagaagtggtcg
atcccggtggagaacctgctgctgccggatctgctgcgccggctgtgctggaccccgccc
gccgacggtgacgtcgccgccgcgctggctgccggcggggcccggccgtggcagatcgcc
ctgacggcaccactgctggagaaggccgtcgccgcgaaggcgtga
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