Pseudonocardia dioxanivorans: Psed_2927
Help
Entry
Psed_2927 CDS
T01479
Name
(GenBank) ABC-type transporter, periplasmic subunit
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psed_2927
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdx02000
]
Psed_2927
Transporters [BR:
pdx02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Psed_2927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
FtsH_ext
Motif
Other DBs
NCBI-ProteinID:
AEA25127
UniProt:
F4CPL0
LinkDB
All DBs
Position
complement(3093229..3094851)
Genome browser
AA seq
540 aa
AA seq
DB search
MRRSVTHRWRTRAAVALVAAGTLVLAACGSNAGPSGPQLRTINPHGDNISTEGTPKDGGT
LILAEDREIVSFDPTVQNSNMAALAVYDSLLKLDDKGEPQPYMARSMETTDNGTTWRMGL
RPEVKFSDGTPLDADAVIFNVQRHIDKKSSPSNRYATVIASMRAVDPTTVEFTLKNPSGT
FPQLFALPFNSGNLGTIVSPTAIRTKGEASIAKEPVGAGPFTLASWVRDSKLTLVRNPNY
WQPGMPHLQGLEFRPLPDTETRYASIENGDVDVVYGGYHTELIRGLGNPNLKVYYGSGNG
AEYIYFNQKRAPFDDRRMREAVVRAIDLDALAASQYRGQMERANGYFGDTSPYQSEQARD
AWPAFDVEKAKQLVADYKASGGSATVQYKTTNAPNRVAFAEFLQAQLKAVGIDIQVQFYD
LAQYSSSVVQSRDFQIAGWVGGPVDGPFPGAFNLFHTGGSTNYGDYSNPQVDAALDTAVS
TTDPAQQTKAYQQVQQLTNQDLAVAYYSRGYLSTIAKPEVKGMQRYLTRDTFFATMWLDR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgttcggtcacccatcgctggcgcacccgagccgctgtcgcactcgtggcggcc
ggcacgttagtgctcgccgcctgcggcagcaacgccggaccctcgggcccgcagctgagg
acgatcaacccccacggcgacaacatctcgaccgagggaaccccgaaggacggcggcacg
ctgatcctcgccgaggaccgcgagatcgtcagcttcgacccgacggtccagaacagcaac
atggccgcgctcgcggtctacgactcgctgctcaagctcgacgacaagggcgaaccccag
ccgtacatggccaggtcgatggagaccaccgacaacggaaccacgtggcggatgggcctt
cgacccgaggtcaagttctccgacggcaccccgctcgacgccgatgccgtgatcttcaac
gtgcagcgacacatcgacaagaagtcctcgccgtcgaaccggtacgccacggtgatcgcg
tcgatgcgcgcggtcgaccccaccaccgtcgagttcacgctcaagaacccgagcgggacg
ttcccgcagctcttcgccctgccgttcaactcgggcaacctcggcacgatcgtctcgccg
acggcgatccgcaccaagggcgaggcgtcgatcgccaaggagcccgtcggtgccggtccg
ttcacactggcgagctgggtccgcgactccaagctgacgctggtgcgcaacccgaactac
tggcagccggggatgccccacctgcagggcctcgagttccgtccgttgcccgacaccgag
acccggtacgcctcgatcgagaacggtgacgtcgacgtggtctacggcggctaccacacc
gagctgatccgcggcctgggcaacccgaacctcaaggtctactacggctccgggaacggc
gcggagtacatctacttcaaccagaagcgcgcgccgttcgacgaccggcggatgcgcgag
gccgtcgtccgcgcgatcgacctcgacgcgctggccgccagccagtaccgcggccagatg
gagcgggcgaacggctacttcggcgacacgagcccgtaccagtccgagcaggcccgcgac
gcgtggccggccttcgacgtcgagaaggccaagcagctcgtcgcggactacaaggccagc
ggcgggagcgcgaccgtccagtacaagacgaccaacgcgccgaaccgcgtcgcgttcgcc
gagttcctgcaggcccagctcaaggccgtcggcatcgacatccaggtgcagttctacgac
ctggcgcagtactcgtcgagcgtcgtgcagagccgtgacttccagatcgccggctgggtc
ggcggtcccgtcgacgggccgttccccggcgcgttcaacctcttccacaccggcggcagc
acgaactacggcgactacagcaacccgcaggtcgacgccgcgctcgacacggccgtctcg
acgaccgacccggcccagcagacgaaggcctaccagcaggtccagcagttgaccaaccag
gacctggcggtcgcctactacagccgcgggtacctgtcgaccatcgcgaagcccgaggtc
aagggcatgcagcggtacctgacccgcgacacgttcttcgcgacgatgtggctcgaccgg
tga
DBGET
integrated database retrieval system
