Pseudonocardia dioxanivorans: Psed_2983
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Entry
Psed_2983 CDS
T01479
Name
(GenBank) ABC-type transporter, periplasmic subunit
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psed_2983
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdx02000
]
Psed_2983
Transporters [BR:
pdx02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Psed_2983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF5818
Motif
Other DBs
NCBI-ProteinID:
AEA25183
UniProt:
F4CR92
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All DBs
Position
3165041..3166627
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AA seq
528 aa
AA seq
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MATALLTVLVTVLAACGGSAAGEGGAGAGPIPATNPYGSDVAAEGTPKDGGVLVLGTDRE
AVSFDPTVQNTNNAAFAVYDSLMKLAPDGSAQPLLAKGMATTDNGRTWRLELREGVRFSD
GTPLNADAVIVNTRRHVEKVRSAAHSFATQIETMTALDPLTVQFTLKAPLGDFPVLFAQN
QYSGTLGLIVSPAALAKYGDDIGSNPVGAGPFVLKSWTRDSKMVLARNPTYWQPGLPHLD
GLEFRPLSDTNSRQASIQNGDVDLAFGAYNQELVAALDNPNLQVFYGPGNSGEFLIFNMT
KPPFDDRNMREAIVRAINLQALSASQYNNRIVPADSLFDAQSPFHTDAASKEWPAFDLEK
AKQLVADYRASGKNPDFTFKTSNSRPPYAEFVQAQIEALGIKVDVQMYDLAQYSASVVQS
GDFQLSTNVASVDYPYPGVRRLFGTGGSTNFGKYSDPQVDALLADAASTTDDDARARAYQ
QVELIVNKDIPVAWTSRVYLATIAEKEVKGIDRYQSRDLFLARTWLDR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
gtggccacggcactgttgacggtgctggtgacggtgctcgccgcctgcggcgggtccgcg
gcgggcgagggcggcgcgggcgccggcccgatcccggccaccaacccctacggcagcgac
gtcgccgccgaggggacgccgaaggacggcggggtgctggtactgggcaccgaccgggag
gcggtcagcttcgacccgacggtgcagaacaccaacaacgcggcgttcgccgtgtacgac
tcgctgatgaagctcgcccccgacgggtcggcacaaccgttgctggccaaggggatggcg
accaccgacaacggccggacgtggcggctggagctgcgggagggcgtgaggttctccgac
ggcacgccgctgaacgccgacgccgtcatcgtcaacacccgccgccacgtcgagaaggtg
cgctcggccgcgcactccttcgcgacccagatcgagaccatgaccgcgctcgacccgctg
acggtgcagttcacgctgaaggccccgctcggtgacttcccggtcctgttcgcgcagaac
cagtactccggcacgctcgggctcatcgtctcgcccgcggcgctcgcgaagtacggcgac
gacatcggcagcaaccccgtcggcgccggcccgttcgtgctcaagagctggacgcgcgac
tcgaagatggtgctggcccgcaacccgacgtactggcagccgggcctgccccacctcgac
gggctggagttccggccgttgtccgacaccaactcccggcaggcctcgatccagaacggt
gacgtcgacctggcgttcggtgcctacaaccaggagctcgtcgcggcgctggacaacccg
aacctgcaggtgttctacggtcccggcaactccggcgagttcctgatcttcaacatgacc
aagccgccgttcgacgaccggaacatgcgcgaggccatcgtgcgcgccatcaacctgcag
gcgctctcggccagccagtacaacaaccggatcgtccccgccgacagcctgttcgacgcg
cagagcccgttccacaccgacgccgcgtcgaaggagtggcccgcgttcgacctggagaag
gcaaagcagctcgtcgccgactaccgggcgtcgggcaagaacccggacttcaccttcaag
acgtccaacagccgcccgccctacgccgagttcgtccaggcccagatcgaggccctcggg
atcaaggtcgacgtgcagatgtacgacctggcgcagtactcggcgtcggtcgtgcagagc
ggggacttccagctgagcaccaacgtggcgtcggtcgactacccctacccgggggtccgg
cggctcttcggcaccggcggcagcaccaatttcggcaagtactccgacccgcaggtcgac
gcgttgctcgccgacgccgcctccacgaccgacgacgacgcgcgggcccgggcctaccag
caggtcgagctcatcgtgaacaaggacatcccggtcgcctggacgagccgggtgtacctg
gcgacgatcgcggagaaggaggtcaaggggatcgaccggtaccagtcgcgcgacctgttc
ctcgcgcgcacctggttggaccgctga
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