Pseudonocardia dioxanivorans: Psed_3375
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Entry
Psed_3375 CDS
T01479
Name
(GenBank) NLP/P60 protein
KO
K21473
peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdx01002
]
Psed_3375
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdx01011
]
Psed_3375
Peptidases and inhibitors [BR:
pdx01002
]
Cysteine peptidases
Family C40
Psed_3375
Peptidoglycan biosynthesis and degradation proteins [BR:
pdx01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
Psed_3375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
TPR_MLP1_2
DUF16
Motif
Other DBs
NCBI-ProteinID:
AEA25565
UniProt:
F4CYC5
LinkDB
All DBs
Position
complement(3604813..3606129)
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AA seq
438 aa
AA seq
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MRVGRAVLVVVLTAALAFAGGTPAALAAPPPTPPPNPSDQDLQNSRNTVSGTAAQVARLT
DRLNELQAQADDLQIQVAEQHESANAAQDTYTAAQKAAADAALKAQQARTETQAAGSAID
AARARLDDFVANTYQGGLDLGPLGLLTSSSGPADFIDRAQLTDYIAQQQTAALDGLQKAR
AEKANADSLARQAQQEADDRAAAAARAKQAADAALADAQQQAAAQAQKLQQVGAQQAEVQ
RQLDAAQNADAGLRAQRQRFDDWQAQQAAAEAARQAAEQRAAAARAGQAPPASVPRSASA
KVQTVIDRAMSQLGVTYAWGGGTARGPSLGIRDGGVADQFGDYRKVGFDCSGLMLYAFAG
VGINLPRYSGNQHAAGRQVPLSQMRPGDMLAWARNGRVYHIALYIGNGKMIEAPYSGSSV
RISPVRYAGLLPTVARMF
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggtcgggcgcgcggtgctcgtggtcgtgctgacggctgctctcgcattcgcgggc
ggcacgccggccgcgctggccgcgccgcccccgacgccgccgccgaaccccagcgaccag
gacctccagaacagtcgcaacacggtgtcgggcacggccgcgcaggtcgcccggctgacc
gaccggctcaacgagctccaggcgcaggccgacgacctgcagatccaggtcgccgagcag
cacgagtcggccaacgccgcgcaggacacctacacggccgcgcagaaggccgcggccgac
gccgcgctgaaggcgcagcaggcccgcaccgagacgcaggcggcgggctcggccatcgac
gccgcccgcgcccgcctcgacgacttcgtcgccaacacctaccagggcggcctcgacctc
ggcccgctcgggctgctcacgtcgtcgagcgggcccgcggacttcatcgaccgcgcccag
ctgaccgactacatcgcccagcagcagaccgccgccctcgacgggctgcagaaggcgcgc
gccgagaaggccaacgcggactccctcgcccggcaggcccagcaggaggccgacgaccgg
gccgctgcggcggcccgggccaagcaggcggccgacgcggcgctggccgacgcccagcag
caggccgcggcgcaggcgcagaagctccagcaggtcggcgcccagcaggccgaggtgcaa
cgtcagctcgacgccgcccagaacgccgacgcggggctgcgggcacagcggcagcgtttc
gacgactggcaggcccagcaggcggcggccgaagccgcccggcaggcggccgagcaacgg
gccgcggcggccagggcggggcaggcaccgcccgcgtcggtgccgcgcagcgcgtcggcg
aaggtgcagaccgtcatcgaccgggccatgtcgcagctcggggtgacctacgcctggggt
ggcgggacggcgcgcggcccgagcctgggcatccgcgacggcggcgtcgccgaccagttc
ggcgactaccggaaggtcggtttcgactgctcggggctgatgctctacgccttcgcgggc
gtcgggatcaacctgccgcgctacagcggcaaccagcacgccgcgggccggcaggtgccc
ctctcgcagatgcggccgggcgacatgctggcgtgggcccgcaacgggcgcgtttaccac
atcgcgctctacatcgggaacggcaagatgatcgaggcgccgtactccggctcgtcggtg
cggatcagcccggtgcgctacgccgggctgctgccgaccgtcgcccggatgttctga
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