Pseudonocardia dioxanivorans: Psed_3422
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Entry
Psed_3422 CDS
T01479
Name
(GenBank) UPF0042 nucleotide-binding protein yhbJ
KO
K06958
RNase adapter protein RapZ
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdx03019
]
Psed_3422
Messenger RNA biogenesis [BR:
pdx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Psed_3422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
Motif
Other DBs
NCBI-ProteinID:
AEA25611
UniProt:
F4CYH1
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All DBs
Position
complement(3659101..3659994)
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AA seq
297 aa
AA seq
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MTADRRDTAPAGIEVALVSGLSGAGRSTAAKVLEDLGWFVVDNLPPELIATMVDLGARAR
GEITRIAVVMDVRSRAFTDDLGAVIKDLDARGYKPRVLFLEATDAVLVRRFEQVRRSHPM
QGDGRLSDGIAAERELLRPLREDADLVVDTSTMSVPLLRATLERTFGDELSPATRVTVLS
FGYKYGLPMDSDLVVDVRFLPNPHWIPELRDFTGRDAAVRDYVLSQEGAEEFIDRYLDLL
ALIGAGYRREGKRYLTVSVGCTGGKHRSVAISEELARRLAGAEHVVVNVSHRDLGRE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcggaccggcgggacacggcgccggcgggtatcgaggtcgcgctggtcagcggc
ctgtccggggccggccgcagtacggcggccaaggtgctggaggacctgggctggttcgtc
gtcgacaacctcccgcccgagctgatcgcgaccatggtcgacctgggtgcccgggcccgg
ggcgagatcacccgcatcgccgtcgtcatggacgtgcgcagccgcgcgttcaccgacgac
ctcggcgcggtgatcaaggatctcgacgccaggggctacaagccgcgggtgctgttcctg
gaggcgaccgacgcggtgctggtccggcgcttcgagcaggtccggcgcagccacccgatg
cagggcgacggacggctgtccgacggcatcgccgcggagcgcgagctgctgcggccgctg
cgcgaggacgcggacctggtcgtcgacacctcgacgatgtcggtgccgctgctgcgcgcc
acgctggagcggacgttcggcgacgagctctcgcccgcgacgcgggtgacggtgctgtcc
ttcggctacaagtacggcctgccgatggactccgacctggtcgtcgacgtgcggttcctg
cccaacccgcactggatccccgagctgcgcgacttcaccgggcgcgacgcggcggtgcgc
gactacgtgctgagccaggagggcgcggaggagttcatcgaccgctacctggacctgctc
gcgctgatcggggcgggctaccgccgcgagggcaagcgctatctcacggtctccgtcggg
tgcaccggcggcaaacaccgtagcgtcgcgatcagcgaggagctggcgcggcggctggcg
ggggccgagcacgtcgtggtgaacgtgtcgcaccgggacctgggacgcgagtga
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