Pseudonocardia dioxanivorans: Psed_3502
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Entry
Psed_3502 CDS
T01479
Name
(GenBank) hypothetical protein
KO
K03265
peptide chain release factor subunit 1
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Psed_3502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdx03019
]
Psed_3502
03012 Translation factors [BR:
pdx03012
]
Psed_3502
Messenger RNA biogenesis [BR:
pdx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Psed_3502
Translation factors [BR:
pdx03012
]
Eukaryotic type
Release factors
Psed_3502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
baeRF_family10
baeRF_family2
baeRF_family12
Host_attach
eRF1_3
baeRF_family5
Rad50_zn_hook
DNA_ligase_ZBD
DUF7575
HMBD
Motif
Other DBs
NCBI-ProteinID:
AEA25680
UniProt:
F4CZE9
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All DBs
Position
complement(3744922..3746064)
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AA seq
380 aa
AA seq
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MLEVETVDRILRLRGDGLPVLSLYVRVDPADRRAFPSRVDEQLHEVRLLAKDTALDRDAR
LSLRGDIERVEEAVQEERLHPRAVAFFSCSGRGVFEDVELPRPVRDRQVVDETTWVRPLL
AVLDEYHRCRVVVADRGRARFFDLYQNEMVECPGRLRDRTLRKPDYAAGMREHTVHNKAE
LLAKRHYRAVAERLDEEARRHEFDIIAFGGHDHEIPELLDHLPAAVRERVAGTFSVHPGE
QDLGRIHRLADQVVERYERAEEQRLVTETLERCSSGGLAVVGLTECLWAGTTAAVNQLLV
QDEAVLPGAVCDHDGYLGVEEDRCPVCGRELRRTPDVVDELVQAVIDQGGSVEHVAAETP
LRVQVTAATLRFRPPPHPAV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggtcgagaccgtcgatcggatcctgcggttgcggggtgacgggctgccggtg
ctgagcctgtacgtccgtgtggatcccgcggatcgccgggcctttccgagccgcgtcgac
gagcaactgcacgaggtgcggctgctcgccaaggacaccgcgctggatcgcgacgcccgg
ttgtcgttgcgcggtgacatcgagcgcgtagaggaggccgtgcaggaggagcgcctgcac
ccgcgggccgttgccttcttctcctgttcgggccggggggtgttcgaggacgtcgagctg
ccgcgaccggtgcgcgaccggcaggtggtcgacgagacgacctgggtccggccgctcctg
gcggtcctcgacgagtaccaccgatgccgcgtcgtagtcgccgaccgcggccgggcccga
ttcttcgacctctaccagaacgagatggtcgagtgcccaggccggctccgggaccggacg
ctgcgcaagcccgactacgcggccggcatgcgggagcacaccgtccacaacaaggccgaa
ctgctcgccaagcggcactaccgtgccgtggccgagcggctggacgaggaggcccgccgc
cacgagttcgacatcatcgccttcggtggtcacgaccacgagatccccgagctcctcgac
cacctgcccgcggcggtgcgcgagcgcgtcgccggaacattctccgtccatcctggcgag
caggacctcggaaggatccacaggctcgccgatcaggtggtggagcgctatgagcgtgca
gaggagcagcggctcgtgaccgagaccctcgaacgctgctcctcgggcgggctcgcggtc
gtaggattgacggaatgcctgtgggcgggcaccaccgccgccgtgaaccagctcctcgtg
caggatgaggcggtgctcccgggcgcggtctgcgatcacgacggctacctcggcgtcgag
gaggaccggtgcccggtgtgcggccgggaactgcgccgcaccccggacgtggtggacgag
cttgtgcaggccgtcatcgaccagggcggatccgttgagcacgtcgcggcggagactccg
ctgcgcgtgcaggtcaccgccgcgacgctccgcttccgcccgccaccgcacccggcggtc
tga
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