Pseudonocardia dioxanivorans: Psed_3583
Help
Entry
Psed_3583 CDS
T01479
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Psed_3583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdx03400
]
Psed_3583
Enzymes [BR:
pdx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Psed_3583
DNA repair and recombination proteins [BR:
pdx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Psed_3583
RecFOR pathway proteins
Psed_3583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_16
TIP49
AAA_5
Mg_chelatase
AAA_14
HTH_AsnC-type
AAA_33
nSTAND3
AAA_3
Resolvase
RNA_helicase
Zeta_toxin
AAA_18
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AEA25755
UniProt:
F4D099
LinkDB
All DBs
Position
complement(3835630..3836670)
Genome browser
AA seq
346 aa
AA seq
DB search
MSEENLRDVGGEVLEEDLDVEGTLRPRRLSEFIGQPRVREQLELVLEGARRRGTPPDHIL
LSGPPGLGKTSLSMIVAAELGAAIRLTSGPALERAGDLAAMLSNLMPGDVLFIDEIHRIA
RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLDIAPFTLVGATTRAGALTGPLRDRFGFTG
HMEFYEPAELELVLRRAAAILEVDLRPDGAAEIARRSRGTPRIANRLLRRVRDFAEVRAD
GAVTLDVAREALAVYDVDELGLDRLDRAVLSALVKSFGGGPVGVSTLAVAVGEEPGTVEE
VCEPYLVRAGMLARTPRGRVATAAAWGHLGVTPPPDVTGQTSQPLF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaggagaacctgcgcgacgtgggcggcgaggtgctcgaggaggacctcgacgtc
gagggcacgctgcggccgcgccggctgtcggagttcatcggccagccccgcgtgcgcgag
cagctcgagctggtgctcgagggcgcccgccggcggggcacgccaccggaccacatcctg
ctgtccggcccgccggggctggggaagacgagcctgtcgatgatcgtggccgccgagctc
ggcgccgcgatccggctgacgtcggggcccgcgctcgaacgcgcgggcgacctcgcggcg
atgctgtcgaacctcatgcccggcgacgtcctgttcatcgacgagatccaccgcatcgcc
cggccggccgaggagatgctctacctcgcgatggaggacttccgcgtcgacgtcgtcgtc
gggaagggccccggcgccacgtccatcccgctcgacatcgcgccgttcacgctggtcggg
gccacgacgcgagccggtgcgctcaccgggccgctgcgcgaccggttcgggttcaccggg
cacatggagttctacgagccggccgagctggagctggtgctgcgccgtgccgcggccatc
ctcgaggtcgacctgcgccccgacggggccgcggagatcgcgcgccggtcccggggcacg
ccccgcatcgccaaccggctgctgcgccgggtgcgcgacttcgcggaggtccgcgcggac
ggcgccgtcaccctcgacgtggcccgcgaggcgctggccgtctacgacgtcgacgagctc
ggtctggaccggctcgaccgcgcggtgctgtccgcgctggtcaagtcgttcggcggcggt
ccggtgggtgtatcgacgctggccgtggcagtgggcgaggaacccggtaccgtcgaggag
gtctgcgagccgtacctggtgcgcgcaggcatgctggcccgcactccgaggggccgggtc
gcgaccgccgcggcatggggccatctgggtgtgacccctcctccggacgtcaccggtcag
acgtcccagccgttgttctga
DBGET
integrated database retrieval system
