Pseudonocardia dioxanivorans: Psed_3887
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Entry
Psed_3887 CDS
T01479
Name
(GenBank) transcriptional regulator, IclR family
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdx03000
]
Psed_3887
Transcription factors [BR:
pdx03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Psed_3887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
MarR
Dimerisation
TrmB
DUF742
Motif
Other DBs
NCBI-ProteinID:
AEA26055
UniProt:
F4CN42
LinkDB
All DBs
Position
complement(4155285..4156109)
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AA seq
274 aa
AA seq
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MPKQSPAGPEPGADPAPERGSGRVQSVERTFELLEAMSDLGGTAGLSQLAARLALPLPTI
HRLVRTLVDLGYVRQQPSREYALGPRLMRLGEHASQLLGTWAMPYLRELVDEIGESANLA
MLDGDHVVYTAQVPGVHAMRMFTEVGRRAQVHCTAVGKAMLALMPPEQADMIVAGSVMHP
QTGHTIITPDGFRAELDRVREAGYAVDNEEQEIGVRCVAVAVPGRAPRAAVSISGPSPRM
SDALIQQAVPLLRRAAEGVAGELEPLRPGTAQAG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcagtccccagcgggtccggagcccggcgcggaccctgcgcccgagcggggg
agcggccgcgtccagtccgtggagcgcaccttcgagctgctggaggcgatgagcgacctc
ggtgggacggcaggcctgtcccagctcgcggcccgtctcgcgctcccgctgccgacgatc
caccggctcgtccgcaccctcgtcgacctcggctacgtgcgccagcagccgtcgcgggag
tacgcgctcgggccgcgcctgatgcgcctgggggagcacgcctcgcagctgctgggcacc
tgggcgatgccctacctgcgcgaactggtcgacgagatcggcgagagcgccaacctcgcg
atgctcgacggcgaccacgtcgtctacaccgcgcaggtcccgggcgtgcacgcgatgcgg
atgttcaccgaggtcggccgccgggcgcaggtgcactgcacggccgtcggcaaggccatg
ctggcgctcatgccgcccgagcaggccgacatgatcgtcgccgggtcggtgatgcacccg
cagacggggcacacgatcatcacgcccgacgggttccgcgccgagctcgaccgggtgcgc
gaggcgggctacgccgtcgacaacgaggaacaggagatcggcgtccggtgcgtcgcggtc
gccgtcccgggccgcgcgccccgggcggccgtctcgatctcgggcccgtcgccgcggatg
tccgacgccctgatccagcaggcggtcccgctgctgcgcagggccgccgagggggtcgcc
ggtgagctggagccgttgcgcccgggaacggcgcaggcgggctga
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