Pseudonocardia dioxanivorans: Psed_3896
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Entry
Psed_3896 CDS
T01479
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Psed_3896
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdx01007
]
Psed_3896
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdx03016
]
Psed_3896
Enzymes [BR:
pdx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Psed_3896
Amino acid related enzymes [BR:
pdx01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Psed_3896
Transfer RNA biogenesis [BR:
pdx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Psed_3896
Prokaryotic type
Other AARSs
Psed_3896
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2_TM
TgpA_N
Motif
Other DBs
NCBI-ProteinID:
AEA26064
UniProt:
F4CN51
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All DBs
Position
4166793..4168586
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AA seq
597 aa
AA seq
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MSRSDGLAGATRTHGGPGGRGPVRPDPAARRLRLTEAAAVRAVVWAARVVALVTVVASVF
PAPRRAIMASLRASLGLPPAVGLAGTVISLVAAVGLWLLAAGLRRRKRRAWALAIAVSAV
LTVVNVLHGLSTGHGYVAAGLTLALLVALVATRHRFVARPDPGGLTRGALVLVQLPVAGF
VLVWVLLALNPRRLDGAPPWWQLAGHAALSLVGVSGPVQFRAGWLDDLTSAVGLSFGVAA
VLVAGYHLLRSPEPEPQLSDDDQARLRALLDKQGGRDSLGYFALREDKTVVFSPTGKSAV
SYRVLAGVALASGDPVGDHEAWPGAIEMFLGECTSYGWVPAVLGCSELGATAWARVGLDV
LEFGDEAVLDVAGFTLEGRAMRGIRQAAARLTRAGYTVRVRRLDELDDDERTALRTHASR
WRGDAVERGYSMALSRVADVRDPRGVLVVAELDGRTRGLLQFVPWGSDGLSLDLMRRDPT
SENGLNELMIAELMAAAEGLGVRRVSLNFAVFRAALERGERIGAGPIARTWAKLLRLASR
WWQIDSLYRFNDKFRPRWVPRYVAFPAVRDLPRILVAALEAEGFGGRPPAVLRLLRR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgttctgacggcctcgcgggagccacccggacccacggcgggccgggcgggcgt
gggccggtccggcccgaccccgcggcaaggcggttgcggctcaccgaggccgccgccgtc
agggccgtcgtgtgggcggcgcgcgtcgtcgcgctggtgacggtcgtcgcctcggtgttc
ccggcgccgcggcgcgccatcatggcctcgctgcgcgcctcgctcggcctcccgcccgcc
gtcgggctggccgggacggtcatctcgctggtcgcggccgtcgggctctggctgctggcc
gcgggactgcgccggcgcaagcggcgggcctgggcgctcgcgatcgccgtcagcgcggtg
ctgaccgtcgtcaacgtgctgcacgggctgtccaccggacacggctacgtcgccgccggg
ctgaccctcgccctgctggtcgccctcgtggccacccgccaccggttcgtcgcccggccc
gacccgggtgggctcacccggggtgcgctggtcctcgtgcagctcccggtcgccgggttc
gtgctcgtgtgggtgctgctggcgctcaaccccaggcgcctcgacggggcgccgccgtgg
tggcagctggcaggccacgcggccctgtcgctggtcggggtgtcggggccggtgcagttc
cgggccggctggctcgacgacctgaccagcgccgtgggactgtcgttcggcgtggccgcg
gtgctcgtcgcgggctaccacctgctgcgctcccccgagcccgagccgcagctgtccgac
gacgaccaggcccggctgcgggcactgctcgacaagcagggcggccgcgactcgctcggc
tacttcgcgctgcgcgaggacaagaccgtcgtcttctccccgacgggaaaatcggcggtc
tcctaccgggtactggccggggtggcgctggcctcgggtgaccccgtcggcgaccacgag
gcctggccgggagccatcgagatgttcctcggcgagtgcacctcctacggctgggtgccc
gcggtgctgggctgctccgaactgggcgcgacggcgtgggcccgcgtcggcctcgacgtc
ctcgagttcggcgacgaggccgtcctcgacgtcgctggcttcacgttggagggccgcgcg
atgcggggcatccggcaggcggccgcccggctcacccgcgccgggtacaccgtccgggtc
cgccggctcgacgagctcgacgacgacgagcgcaccgcgctgcggacccacgcgtcgcgg
tggcgcggcgacgcggtcgagcgcggctactcgatggcgctgtcccgggtcgcggacgtc
cgcgatccccgcggcgtgctggtcgtcgccgagctcgacggacggacccgcgggctgctg
cagttcgtcccctggggctccgacggcttgtcgctcgacctcatgcgccgcgacccgacc
tcggagaacgggctcaacgagctgatgatcgccgagctgatggccgcggccgagggcctg
ggcgtgcggcgggtgtcgttgaacttcgcggtgttccgggccgcgctggagcgcggcgag
cggatcggcgcgggtccgatcgcgcggacatgggcgaagctgctgcggctcgcgtcgcgg
tggtggcagatcgacagcctctaccggttcaacgacaagttccgcccgcgctgggtgccg
cgctacgtcgcgttccccgccgtccgggacctgccgcggatcctggtcgccgcgctggag
gccgagggcttcggcggccgcccgcccgccgtgctgcggctgctgcgtcgttga
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