Pseudonocardia benzenivorans: Psed_3943
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Entry
Psed_3943 CDS
T01479
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pdx
Pseudonocardia benzenivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdx03400
]
Psed_3943
DNA repair and recombination proteins [BR:
pdx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Psed_3943
Archaeal homologous recombinant proteins
Psed_3943
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Metallophos_3
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
AEA26110
UniProt:
F4CPS7
LinkDB
All DBs
Position
complement(4222766..4223941)
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AA seq
391 aa
AA seq
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MRILHTADWHVGKTLKGHSRLDEQREVLREIVAIAREQEVDLVVVAGDLYDTAAPNAAAQ
QLVVQALTALAGTGAEVLVIGGNHDHGAALDAYRPFAAAAGITLVGTVRTAEQGGVVDMV
TRGGERASIAVLPFLSQRYAVRAAELVAQLPAQHNAAYDEQLRGIVRSLTDGFRTDSVNL
VAAHLTVLNGTFGGGERLAQSIFEYSVPASIFPADTHYVALGHLHRRQMLAAPAPVHYSG
SPLAVDFGEQANTSVVCLVEATATTPARVTDIPVTAGRGLRTLHGTVDELAALRDTVGDD
YLRVFVREPARAGLREDVTAVLPNALEVRIDPEFAAPVRGSRPSEGRGAERSPSELFGEY
CRDRAVADPRLDALFARLHDAVTSSDTGGAR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctgcacacggccgactggcacgtcggcaagacgttgaagggccacagccgg
ctcgacgagcagcgcgaggtactgcgcgagatcgtcgcgatcgcccgagagcaggaggtc
gacctggtcgtcgtggccggcgacctgtacgacaccgccgcgcccaacgccgccgcgcag
cagctcgtcgtgcaggctctcaccgcgctggcgggtacgggggcggaggtcctcgtcatc
ggcggcaaccacgaccacggcgcggcgctcgacgcgtaccggcccttcgccgcggcggcc
gggatcaccctggtcgggacggtccggacggccgagcagggcggcgtcgtcgacatggtc
acccgcggcggggagcgggcgagcatcgcggtgctgccgttcctgtcgcagcgctacgcg
gtgcgggcggccgagctcgtcgcgcagctcccggcccagcacaacgcggcctacgacgag
cagctgcgcgggatcgtgcgctcgctcaccgacggtttccgcaccgactcggtgaacctg
gtggcggcgcacctcaccgtcctcaacggcacgttcgggggaggggagcggctcgcccag
tcgatcttcgagtactcggtgcccgcgtcgatcttcccggccgacacccactacgtggcg
ctgggccacctgcaccgcaggcagatgctcgccgcgcccgcgccggtgcactactcgggc
tcgccgctcgcggtcgacttcggcgagcaggccaacacgagcgtcgtctgcctggtcgag
gccacggcgacgacgcccgcccgggtcaccgacatccccgtcaccgccggccgcggattg
cgcacgctgcacggcacggtcgacgagctggccgcgttgcgcgacaccgtcggcgacgac
tacctgcgcgtcttcgtgcgcgaacccgcgcgggcggggttgcgcgaggacgtcacggcc
gtgctgccgaacgcgctggaggtgcggatcgaccccgagttcgcggcgccggtccgcggg
tcgcggccgtcggagggccggggggccgagcgcagcccgtcggagctgttcggcgagtac
tgccgcgaccgggcggtcgccgacccgcggctcgacgcgttgttcgcccggctgcacgac
gcggtcaccagttccgacaccgggggtgcgcgatga
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